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RTP_092018_0_1um_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 607 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_092018_0_1um_scaffold_27_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..9045)
DNA (9045bp) protein (3015aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000376C3E2
Uncharacterized protein {ECO:0000313|EMBL:CCU63979.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
filamentous hemagglutinin
RTP_092018_0_1um_scaffold_27_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9196..10812)
DNA (1617bp) protein (539aa)
Hemolysin activation/secretion protein id=1372911 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hemolysin activation/secretion protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_092018_0_1um_scaffold_27_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10989..12575)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKH0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63976.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
RTP_092018_0_1um_scaffold_27_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12642..13544)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DXJ8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63975.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
RTP_092018_0_1um_scaffold_27_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13778..14569)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000368F849
LuxR family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15727..17556
DNA (1830bp) protein (610aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367B27A
diguanylate cyclase/phosphodiesterase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17765..18307)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000368D3E3
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18794..19039
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381C689
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19418..20248)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHX7_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97756.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_092018_0_1um_scaffold_27_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20337..21029)
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGP2_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22309..23277)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000374CE90
Uncharacterized protein {ECO:0000313|EMBL:KIO48331.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
RTP_092018_0_1um_scaffold_27_12
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23344..24090)
DNA (747bp) protein (249aa)
PEP-CTERM putative exosortase interaction domain-containing protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVV9_9BURK
outer membrane adhesin-like protein
Tax=BJP_08E140C01_Dechloromonas_61_78
RTP_092018_0_1um_scaffold_27_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24160..24669)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00036A6E73
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24749..27091)
DNA (2343bp) protein (781aa)
Putative alkaline phosphatase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MM10_9BURK
5'-nucleotidase domain-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27337..27981)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003662FF5
PEP-CTERM putative exosortase interaction domain protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28045..29082)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000376266B
putative transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29126..30862)
DNA (1737bp) protein (579aa)
stationary-phase survival protein SurE (EC:3.1.3.8 3.1.3.5)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037A9B88
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31007..32461)
DNA (1455bp) protein (485aa)
3-phytase, Alkaline phosphatase (EC:3.1.3.8 3.1.3.1)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00037E57A8
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32770..34074)
DNA (1305bp) protein (435aa)
Glycerophosphoryl diester phosphodiesterase family protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFG6_THIDA
glycerophosphoryl diester phosphodiesterase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_20
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34303..34593)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037A70C8
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
RTP_092018_0_1um_scaffold_27_21
unknown

Not on your lists

comp(34651..35547)
DNA (897bp) protein (299aa)

This feature has no annotations

RTP_092018_0_1um_scaffold_27_22
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35571..36377)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000370C0A6
PEP motif putative anchor domain-containing protein
PEP motif putative anchor domain protein {ECO:0000313|EMBL:ADZ27849.1}; Flags: Precursor;; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
RTP_092018_0_1um_scaffold_27_23
unknown

Not on your lists

comp(36405..37352)
DNA (948bp) protein (316aa)

This feature has no annotations

RTP_092018_0_1um_scaffold_27_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37939..39339)
DNA (1401bp) protein (467aa)
PEP motif putative anchor domain protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFE9_NITSI
PEP motif anchor domain-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39530..42685)
DNA (3156bp) protein (1052aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00036D0A3F
endonuclease/exonuclease/phosphatase family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42917..43510
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FCD9C
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43562..44572)
DNA (1011bp) protein (337aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Thiobacillus thioparus RepID=UPI000369510D
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_27_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44705..44986)
DNA (282bp) protein (94aa)
Helix-turn-helix type 3 domain protein n=1 Tax=mine drainage metagenome RepID=T0ZXN3_9ZZZZ
XRE family transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_27_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44983..45309)
DNA (327bp) protein (109aa)
Uncharacterized protein n=5 Tax=Xylella fastidiosa RepID=B2I506_XYLF2
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_27_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45369..46283)
DNA (915bp) protein (305aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Thiobacillus thioparus RepID=UPI0003746292
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying items 1-30 of 607 in total

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