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RTP_092018_0_1um_scaffold_27_42

Organism: RTP_092018_0_1um_Hydrogenophilales_62_10

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(53804..54229)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 141.0
  • Bit_score: 179
  • Evalue 2.30e-42
transcriptional regulator n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036064FB similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 141.0
  • Bit_score: 181
  • Evalue 3.30e-43
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 141.0
  • Bit_score: 179
  • Evalue 4.70e-43

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Taxonomy

Thioalkalivibrio sulfidiphilus → Thioalkalivibrio → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
GTGAGCCGGACGCGCTGTTATTTGCTGGACACCAACATCCTGTCAGACCTGGTGCGTTACCCGCAGGGCAGGGTTGCGCAACGCATCGCCCACGTGGGGGAAACGGCCGTCTGCACCTCGATGATCGTGGCAAGTGAATTACGCTTTGGTGCCGCCAAGAAAAATGCGGACAAGCTCACTGCGCAGGTGGAAACCATCCTTGCTGCGATGATTGTCCACCCATTTGAATCACCAGCAGATCGCGAATACGCAAAACTGCGTCATGACCTTGAGCAGGCCGGCACGCCCATCGGGCCGAATGACATGCTGATTGCCGCGCACGCCCTTGCCACCGGCTGCATTCTGGTTACGGCAAATAAGCGCGAATTTGCTCGAGTGCCCGGGCTCACCGTTGAAAACTGGCTGGAAGTGCTGCCACAAGAATGA
PROTEIN sequence
Length: 142
VSRTRCYLLDTNILSDLVRYPQGRVAQRIAHVGETAVCTSMIVASELRFGAAKKNADKLTAQVETILAAMIVHPFESPADREYAKLRHDLEQAGTPIGPNDMLIAAHALATGCILVTANKREFARVPGLTVENWLEVLPQE*