ggKbase home page

RTP_11222018_0_1um_scaffold_2905_6

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(4331..4624)

Top 3 Functional Annotations

Value Algorithm Source
addiction module toxin RelE n=1 Tax=Pseudomonas agarici RepID=UPI0003118DF8 similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 95.0
  • Bit_score: 126
  • Evalue 1.10e-26
Cytotoxic translational repressor of toxin-antitoxin stability system {ECO:0000313|EMBL:EJM65550.1}; TaxID=1144332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM50.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 95.0
  • Bit_score: 125
  • Evalue 2.70e-26
plasmid stabilization protein similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 96.0
  • Bit_score: 99
  • Evalue 4.20e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. GM50 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
TTGATAACGTGGGCTATAATTTATCACCCCGAAGTCGAGCATGATCTGCTGACTCTAGGACGAACGGAAGCAAGAGTAATTCTGAAAGTGATTGAAGAACGTATTGCGCAAGGCGAACCAGATAAATTGGGAAAGCCACTCTCAGGACAGCTTTCTGGCTGTAGGCGAATTCGAACAGGGCAGACAAGAATTGTTTATCGTGTTGATGGTGGACGAATTGAAGTTTTGATTGTTGCGGTCGGGATGCGCCGTGATAATGAAATCTGCGATGCAGCATCTGGCAGAGTTGATTAA
PROTEIN sequence
Length: 98
LITWAIIYHPEVEHDLLTLGRTEARVILKVIEERIAQGEPDKLGKPLSGQLSGCRRIRTGQTRIVYRVDGGRIEVLIVAVGMRRDNEICDAASGRVD*