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This organism can only be binned in the context of its binning project SCN18_31_3_15_R4_B. Please contact the project owner (rohansach@berkeley.edu) to become a member and gain access.

RTP_11222018_0_1um_scaffold_2905_7

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(4621..4905)

Top 3 Functional Annotations

Value Algorithm Source
Phd-YefM id=1743283 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 89.0
  • Bit_score: 91
  • Evalue 3.90e-16
prevent-host-death family protein similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 85.0
  • Bit_score: 65
  • Evalue 8.50e-09
Tax=GWD2_Desulfuromonadales_61_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 89.0
  • Bit_score: 99
  • Evalue 1.60e-18

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Taxonomy

GWD2_Desulfuromonadales_61_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGCTACTGGAACGCGCTGACCAAGCTATATCATCTACTGACCTTCAAAAAAATGCACGCTTGTTGCTGGATCGCATGGCCGATGGCAGTCAGGATCGCTATGTCGTAATACGTGACAATCGACCCACTGCTGTTATGCTGCCAACTGCACGCTACGAAGCATTAATGAGCGAACTTGAAGACCTCCGCATTGAGGCAGTGGCGCATGAGCGCCTATCCTCTATCGGACAGGTTGAGACGCTGACACACGAAGAGATGCTGGCGCGCATAGAAGGTTCTAGTTGA
PROTEIN sequence
Length: 95
MLLERADQAISSTDLQKNARLLLDRMADGSQDRYVVIRDNRPTAVMLPTARYEALMSELEDLRIEAVAHERLSSIGQVETLTHEEMLARIEGSS*