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RTP_11222018_0_1um_scaffold_2905

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_2905_1
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(2..292)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003787FF2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL66208.1}; TaxID=290317 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain DSM 266).;"
RTP_11222018_0_1um_scaffold_2905_2

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comp(387..1730)
DNA (1344bp) protein (448aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CBI10246.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CBI10246.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=mine drainage metagenome RepID=E6QSM4_9ZZZZ
N-acetylmuramoyl-L-alanine amidase
RTP_11222018_0_1um_scaffold_2905_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1688..2191)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000362E260
hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
RTP_11222018_0_1um_scaffold_2905_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2255..3238
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Methylophilus methylotrophus RepID=UPI0003773CCA
4Fe-4S ferredoxin
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
RTP_11222018_0_1um_scaffold_2905_5

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3211..4053
DNA (843bp) protein (281aa)
Glutamate racemase {ECO:0000313|EMBL:CBI10707.1}; EC=5.1.1.3 {ECO:0000313|EMBL:CBI10707.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=mine drainage metagenome RepID=E6QTY5_9ZZZZ
RTP_11222018_0_1um_scaffold_2905_trna_1
unknown

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4118..4189
DNA (72bp)
transferRNA Thr
RTP_11222018_0_1um_scaffold_2905_6
Pseudomonas sp. GM50, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4331..4624)
DNA (294bp) protein (98aa)
addiction module toxin RelE n=1 Tax=Pseudomonas agarici RepID=UPI0003118DF8
Cytotoxic translational repressor of toxin-antitoxin stability system {ECO:0000313|EMBL:EJM65550.1}; TaxID=1144332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM50.;"
plasmid stabilization protein
RTP_11222018_0_1um_scaffold_2905_7
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4621..4905)
DNA (285bp) protein (95aa)
Phd-YefM id=1743283 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
prevent-host-death family protein
Tax=GWD2_Desulfuromonadales_61_12_curated
RTP_11222018_0_1um_scaffold_2905_8
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5081..6352)
DNA (1272bp) protein (424aa)
Type I restriction-modification system, restriction subunit R n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VX93_9BURK
Type I restriction-modification system, restriction subunit R {ECO:0000313|EMBL:EGF32778.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
HsdR family type I site-specific deoxyribonuclease
RTP_11222018_0_1um_scaffold_2905_9
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6307..7728)
DNA (1422bp) protein (474aa)
DEAD/DEAH box helicase n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI0003722B4F
DEAD/DEAH box helicase {ECO:0000313|EMBL:KIA78880.1}; Flags: Fragment;; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;"
HsdR family type I site-specific deoxyribonuclease
Displaying 10 items

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