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SW_10_Bacteroidetes_40_5

In projects: SW_10

Consensus taxonomy: Bacteroidetes  →  Bacteria

Metagenomic Context

Parent: SW_10_UNK

Properties

Avg. coverage: 5.33 Longest contig: 11.36 Kbp Bin length: 1.08 Mbp GC content: 39.90 %
Contigs count: 499 Features count: 1322 rRNAs count: 0 tRNAs count: 9

Genome completeness

partial RP 37 / 55 MC: 5 BSCG 36 / 51 MC: 5 ASCG 8 / 38
Displaying items 251-300 of 499 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_10_scaffold_23155
Species: RBG_13_Bacteroidetes_43_22_curated (50%)
2 1506 bp 39.58 5.84 67.73
sw_10_scaffold_7159
Species: Marivirga tractuosa (50%)
2 1990 bp 41.76 5.03 88.04
sw_10_scaffold_14894
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
2 1976 bp 40.18 5.92 102.33
sw_10_scaffold_13742
Species: Sphingobacterium spiritivorum (50%)
2 1303 bp 38.99 4.83 75.75
sw_10_scaffold_18565
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated (50%)
2 1053 bp 41.60 5.03 99.72
sw_10_scaffold_13518
Species: GWF2_Bacteroidetes_35_48_curated (50%)
2 1317 bp 39.94 5.92 71.75
sw_10_scaffold_17227
Species: Tannerella sp. CAG:51 (50%)
2 1112 bp 38.31 4.59 71.49
sw_10_scaffold_9936
Species: Solitalea canadensis (50%)
2 1609 bp 38.78 4.91 76.26
sw_10_scaffold_13061
Species: Mariniradius saccharolyticus (50%)
2 1346 bp 42.20 4.75 76.23
sw_10_scaffold_15849
Species: Capnocytophaga gingivalis (50%)
2 1182 bp 42.13 4.31 82.74
sw_10_scaffold_4409
Species: Pseudopedobacter saltans (50%)
2 2690 bp 39.78 6.69 98.03
sw_10_scaffold_10069
Species: Polaribacter sp. MED152 (50%)
2 2192 bp 40.78 6.25 64.05
sw_10_scaffold_12142
Species: Coprobacter fastidiosus (50%)
2 1414 bp 40.95 4.60 90.81
sw_10_scaffold_17233
Species: Phaeodactylibacter xiamenensis (50%)
2 1112 bp 42.45 4.41 75.27
sw_10_scaffold_15139
Species: Runella slithyformis (50%)
2 1871 bp 38.91 5.56 94.44
sw_10_scaffold_9023
Species: Hymenobacter sp. DG25B (50%)
2 1712 bp 41.82 5.61 72.72
sw_10_scaffold_19290
Species: Pedobacter glucosidilyticus (50%)
2 1024 bp 41.80 4.69 39.26
sw_10_scaffold_15374
Species: Marivirga tractuosa (50%)
2 1206 bp 40.38 4.15 83.33
sw_10_scaffold_10537
Species: Niastella koreensis (50%)
2 1551 bp 38.30 4.51 71.95
sw_10_scaffold_11459
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 1466 bp 44.07 3.62 92.29
sw_10_scaffold_10769
Species: Owenweeksia hongkongensis (50%)
2 1527 bp 42.89 4.65 78.59
sw_10_scaffold_5803
Species: Dyadobacter fermentans (50%)
2 2264 bp 42.89 5.34 77.25
sw_10_scaffold_12845
Species: Marivirga tractuosa (50%)
2 1363 bp 39.77 4.48 93.32
sw_10_scaffold_16092
Species: GWA2_Bacteroidetes_30_7_curated (50%)
2 1169 bp 40.38 5.65 70.06
sw_10_scaffold_17244
Species: GWE2_Bacteroidetes_29_8_curated (50%)
2 1112 bp 40.29 5.04 75.81
sw_10_scaffold_17705
Species: GWF2_Bacteroidetes_38_335_curated (50%)
2 1091 bp 38.13 4.95 81.67
sw_10_scaffold_16973
Species: GWF2_Bacteroidetes_41_31_curated (50%)
2 1124 bp 42.17 5.16 91.81
sw_10_scaffold_10082
Species: Marivirga tractuosa (50%)
2 1595 bp 41.19 4.83 94.61
sw_10_scaffold_15403
Species: GWE2_Bacteroidetes_40_63_curated (50%)
2 1205 bp 38.51 4.73 63.98
sw_10_scaffold_15404
Species: Nitritalea halalkaliphila (50%)
2 1205 bp 38.67 5.64 94.11
sw_10_scaffold_16097
Species: Pedobacter sp. NL19 (50%)
2 1168 bp 38.53 5.91 95.80
sw_10_scaffold_26628
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 1481 bp 41.59 4.46 91.36
sw_10_scaffold_29038
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
2 1335 bp 38.73 4.64 91.91
sw_10_scaffold_4200
Species: Solitalea canadensis (50%)
2 2766 bp 40.13 4.92 88.61
sw_10_scaffold_9730
Species: GWE2_Bacteroidetes_40_63_curated (50%)
2 1633 bp 41.89 5.76 82.49
sw_10_scaffold_11240
Species: Sphingobacterium sp. ACCC 05744 (50%)
2 1484 bp 43.33 4.72 99.87
sw_10_scaffold_13545
Species: Algibacter lectus (50%)
2 1315 bp 38.33 6.24 78.25
sw_10_scaffold_16750
Species: GWA2_Bacteroidetes_31_9b_curated (50%)
2 1134 bp 39.51 4.23 83.33
sw_10_scaffold_17255
Species: GWD2_Bacteroidetes_33_33_curated (50%)
2 1111 bp 41.40 7.92 41.31
sw_10_scaffold_11012
Species: Alistipes putredinis (50%)
2 1505 bp 39.00 4.92 96.88
sw_10_scaffold_9734
Species: Fulvivirga imtechensis (50%)
2 1632 bp 40.81 3.80 86.58
sw_10_scaffold_7430
Species: Solitalea canadensis (50%)
2 1943 bp 37.88 6.64 51.42
sw_10_scaffold_13091
Species: Rhodonellum psychrophilum (50%)
2 1345 bp 41.78 5.35 94.80
sw_10_scaffold_16526
Species: GWE2_Bacteroidetes_42_39_curated (50%)
2 1145 bp 43.14 5.85 74.41
sw_10_scaffold_19082
Species: Aquimarina atlantica (50%)
2 1780 bp 39.44 5.84 66.57
sw_10_scaffold_9508
Species: Runella slithyformis (50%)
2 1655 bp 39.64 4.83 61.99
sw_10_scaffold_16109
Species: GWA2_Bacteroidetes_31_9b_curated (50%)
2 1167 bp 40.19 4.11 84.06
sw_10_scaffold_14707
Species: Hymenobacter sp. APR13 (50%)
2 1245 bp 41.37 4.50 94.94
sw_10_scaffold_8359
Species: Flavobacterium beibuense (50%)
2 1804 bp 42.41 4.93 87.14
sw_10_scaffold_4905
Species: Pedobacter sp. V48 (50%)
2 2519 bp 39.62 4.68 94.56
Displaying items 251-300 of 499 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.