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SW_10_Bacteroidetes_40_5

In projects: SW_10

Consensus taxonomy: Bacteroidetes  →  Bacteria

Metagenomic Context

Parent: SW_10_UNK

Properties

Avg. coverage: 5.33 Longest contig: 11.36 Kbp Bin length: 1.08 Mbp GC content: 39.90 %
Contigs count: 499 Features count: 1322 rRNAs count: 0 tRNAs count: 9

Genome completeness

partial RP 37 / 55 MC: 5 BSCG 36 / 51 MC: 5 ASCG 8 / 38
Displaying items 301-350 of 499 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_10_scaffold_9978
Species: Sporocytophaga myxococcoides (50%)
2 1604 bp 42.33 4.80 89.21
sw_10_scaffold_11257
Species: BJP_08E140C01_Bacteriodales_41_10 (50%)
2 1483 bp 39.99 4.86 72.22
sw_10_scaffold_14713
Species: Anditalea andensis (50%)
2 1244 bp 40.92 5.79 100.80
sw_10_scaffold_5830
Species: GWF2_Bacteroidetes_35_48_curated (50%)
2 2259 bp 39.62 5.31 91.77
sw_10_scaffold_13562
Species: Hymenobacter sp. DG25B (50%)
2 1314 bp 42.09 4.87 90.41
sw_10_scaffold_4224
Species: Rhodothermus marinus (50%)
2 2754 bp 41.43 4.18 73.20
sw_10_scaffold_9750
Species: Niastella koreensis (50%)
2 1630 bp 40.06 5.58 100.12
sw_10_scaffold_14488
Species: Marivirga tractuosa (50%)
2 1257 bp 38.90 5.01 90.45
sw_10_scaffold_14027
Species: Phaeodactylibacter xiamenensis (50%)
2 1285 bp 43.19 5.68 91.05
sw_10_scaffold_4453
Species: Psychroflexus torquis (50%)
2 2674 bp 39.15 5.39 93.12
sw_10_scaffold_7218
Species: Winogradskyella psychrotolerans (50%)
2 1981 bp 42.76 5.70 93.89
sw_10_scaffold_9293
Species: Winogradskyella psychrotolerans (50%)
2 1678 bp 40.23 5.01 76.88
sw_10_scaffold_15181
Species: GWC2_Bacteroidetes_46_850_curated (50%)
2 3222 bp 37.96 7.01 28.68
sw_10_scaffold_2676
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
2 3602 bp 38.53 5.55 92.45
sw_10_scaffold_9064
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated (50%)
2 1706 bp 38.57 6.21 48.89
sw_10_scaffold_14261
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated (50%)
2 2104 bp 38.74 8.22 95.82
sw_10_scaffold_16775
Species: Flavobacterium johnsoniae (50%)
2 1133 bp 38.57 5.56 68.84
sw_10_scaffold_13571
Species: RBG_13_Bacteroidetes_42_15_curated (50%)
2 1314 bp 38.89 4.41 95.89
sw_10_scaffold_8838
Species: GWA2_Bacteroidetes_30_7_curated (50%)
2 1738 bp 41.14 5.29 99.60
sw_10_scaffold_4461
Species: Siansivirga zeaxanthinifaciens (50%)
2 2671 bp 38.71 5.24 96.59
sw_10_scaffold_33376
Species: Chitinophaga pinensis (50%)
2 1169 bp 38.75 3.93 48.50
sw_10_scaffold_11964
Species: Cesiribacter andamanensis (50%)
2 1427 bp 38.19 5.89 35.11
sw_10_scaffold_17747
Species: unidentified eubacterium SCB49 (50%)
2 1089 bp 37.92 5.05 77.13
sw_10_scaffold_15904
Species: GWE2_Bacteroidetes_40_63_curated (50%)
2 1178 bp 42.53 4.50 53.48
sw_10_scaffold_12427
Species: Flavihumibacter sp. ZG627 (50%)
2 1392 bp 39.80 4.96 103.02
sw_10_scaffold_9535
Species: Geofilum rubicundum (50%)
2 1652 bp 41.77 6.11 70.10
sw_10_scaffold_9999
Species: Cyclobacterium qasimii (50%)
2 1602 bp 40.26 4.43 67.60
sw_10_scaffold_9079
Species: Anditalea andensis (50%)
2 2266 bp 40.60 5.56 85.53
sw_10_scaffold_12895
Species: Cecembia lonarensis (50%)
2 1359 bp 38.85 4.42 60.04
sw_10_scaffold_7007
Species: Solitalea canadensis (50%)
2 2016 bp 40.72 4.86 83.63
sw_10_scaffold_6089
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
2 2199 bp 39.11 4.96 97.27
sw_10_scaffold_9545
Species: GWF2_Bacteroidetes_41_31_curated (50%)
2 2534 bp 41.95 5.41 92.46
sw_10_scaffold_16333
Species: Pedobacter heparinus (50%)
2 1156 bp 40.31 5.88 100.43
sw_10_scaffold_7937
Species: Marivirga tractuosa (50%)
2 1865 bp 41.23 4.99 99.57
sw_10_scaffold_13133
Species: Bacteroides sp. CAG:20 (50%)
2 1342 bp 39.34 4.40 68.41
sw_10_scaffold_18643
Species: Pontibacter korlensis (50%)
2 1050 bp 41.24 5.24 76.29
sw_10_scaffold_5866
Species: Cecembia lonarensis (50%)
2 2251 bp 41.05 5.33 92.76
sw_10_scaffold_7709
Species: Flavobacterium aquatile (50%)
2 1902 bp 38.85 6.26 64.83
sw_10_scaffold_6558
Species: Belliella baltica (50%)
2 2103 bp 39.75 4.99 60.20
sw_10_scaffold_14062
Species: Haliscomenobacter hydrossis (50%)
2 1283 bp 37.72 5.30 75.76
sw_10_scaffold_18000
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated (50%)
2 1077 bp 39.18 3.81 86.91
sw_10_scaffold_10838
Species: Sphingobacterium sp. ACCC 05744 (50%)
2 1522 bp 42.44 5.26 97.37
sw_10_scaffold_14524
Species: Aquimarina atlantica (50%)
2 1255 bp 43.35 5.26 100.88
sw_10_scaffold_20564
Species: Pedobacter glucosidilyticus (50%)
2 1808 bp 41.21 5.48 92.26
sw_10_scaffold_2694
Species: GWF2_Bacteroidetes_35_48_curated (50%)
2 3588 bp 40.77 5.18 87.88
sw_10_scaffold_5872
Species: Schleiferia thermophila (50%)
2 2974 bp 38.50 5.08 75.76
sw_10_scaffold_12454
Species: BJP_IG2103_Bacteroidetes_37_22 (50%)
2 1390 bp 40.43 6.19 98.42
sw_10_scaffold_17545
Species: Cecembia lonarensis (50%)
2 1099 bp 42.49 4.64 98.82
sw_10_scaffold_17315
Species: Croceibacter atlanticus (50%)
2 1108 bp 42.15 5.14 99.37
sw_10_scaffold_23655
Species: Fibrisoma limi (50%)
2 1421 bp 42.79 4.57 92.47
Displaying items 301-350 of 499 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.