ggKbase | organisms

SW_10_Bacteroidetes_40_5

In projects: SW_10

Consensus taxonomy: Bacteroidetes → Bacteria

Metagenomic Context

Parent: SW_10_UNK

Properties

Avg. coverage: 5.33 Longest contig: 11.36 Kbp Bin length: 1.08 Mbp GC content: 39.90 %

Contigs count: 499 Features count: 1322 rRNAs count: 0 tRNAs count: 9

Genome completeness

partial RP 37 / 55 MC: 5 BSCG 36 / 51 MC: 5 ASCG 8 / 38

Displaying items 301-350 of 499 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
sw_10_scaffold_9978 Species: Sporocytophaga myxococcoides (50%)	2	1604 bp	42.33	4.80	89.21
sw_10_scaffold_11257 Species: BJP_08E140C01_Bacteriodales_41_10 (50%)	2	1483 bp	39.99	4.86	72.22
sw_10_scaffold_14713 Species: Anditalea andensis (50%)	2	1244 bp	40.92	5.79	100.80
sw_10_scaffold_5830 Species: GWF2_Bacteroidetes_35_48_curated (50%)	2	2259 bp	39.62	5.31	91.77
sw_10_scaffold_13562 Species: Hymenobacter sp. DG25B (50%)	2	1314 bp	42.09	4.87	90.41
sw_10_scaffold_4224 Species: Rhodothermus marinus (50%)	2	2754 bp	41.43	4.18	73.20
sw_10_scaffold_9750 Species: Niastella koreensis (50%)	2	1630 bp	40.06	5.58	100.12
sw_10_scaffold_14488 Species: Marivirga tractuosa (50%)	2	1257 bp	38.90	5.01	90.45
sw_10_scaffold_14027 Species: Phaeodactylibacter xiamenensis (50%)	2	1285 bp	43.19	5.68	91.05
sw_10_scaffold_4453 Species: Psychroflexus torquis (50%)	2	2674 bp	39.15	5.39	93.12
sw_10_scaffold_7218 Species: Winogradskyella psychrotolerans (50%)	2	1981 bp	42.76	5.70	93.89
sw_10_scaffold_9293 Species: Winogradskyella psychrotolerans (50%)	2	1678 bp	40.23	5.01	76.88
sw_10_scaffold_15181 Species: GWC2_Bacteroidetes_46_850_curated (50%)	2	3222 bp	37.96	7.01	28.68
sw_10_scaffold_2676 Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)	2	3602 bp	38.53	5.55	92.45
sw_10_scaffold_9064 Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated (50%)	2	1706 bp	38.57	6.21	48.89
sw_10_scaffold_14261 Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated (50%)	2	2104 bp	38.74	8.22	95.82
sw_10_scaffold_16775 Species: Flavobacterium johnsoniae (50%)	2	1133 bp	38.57	5.56	68.84
sw_10_scaffold_13571 Species: RBG_13_Bacteroidetes_42_15_curated (50%)	2	1314 bp	38.89	4.41	95.89
sw_10_scaffold_8838 Species: GWA2_Bacteroidetes_30_7_curated (50%)	2	1738 bp	41.14	5.29	99.60
sw_10_scaffold_4461 Species: Siansivirga zeaxanthinifaciens (50%)	2	2671 bp	38.71	5.24	96.59
sw_10_scaffold_33376 Species: Chitinophaga pinensis (50%)	2	1169 bp	38.75	3.93	48.50
sw_10_scaffold_11964 Species: Cesiribacter andamanensis (50%)	2	1427 bp	38.19	5.89	35.11
sw_10_scaffold_17747 Species: unidentified eubacterium SCB49 (50%)	2	1089 bp	37.92	5.05	77.13
sw_10_scaffold_15904 Species: GWE2_Bacteroidetes_40_63_curated (50%)	2	1178 bp	42.53	4.50	53.48
sw_10_scaffold_12427 Species: Flavihumibacter sp. ZG627 (50%)	2	1392 bp	39.80	4.96	103.02
sw_10_scaffold_9535 Species: Geofilum rubicundum (50%)	2	1652 bp	41.77	6.11	70.10
sw_10_scaffold_9999 Species: Cyclobacterium qasimii (50%)	2	1602 bp	40.26	4.43	67.60
sw_10_scaffold_9079 Species: Anditalea andensis (50%)	2	2266 bp	40.60	5.56	85.53
sw_10_scaffold_12895 Species: Cecembia lonarensis (50%)	2	1359 bp	38.85	4.42	60.04
sw_10_scaffold_7007 Species: Solitalea canadensis (50%)	2	2016 bp	40.72	4.86	83.63
sw_10_scaffold_6089 Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)	2	2199 bp	39.11	4.96	97.27
sw_10_scaffold_9545 Species: GWF2_Bacteroidetes_41_31_curated (50%)	2	2534 bp	41.95	5.41	92.46
sw_10_scaffold_16333 Species: Pedobacter heparinus (50%)	2	1156 bp	40.31	5.88	100.43
sw_10_scaffold_7937 Species: Marivirga tractuosa (50%)	2	1865 bp	41.23	4.99	99.57
sw_10_scaffold_13133 Species: Bacteroides sp. CAG:20 (50%)	2	1342 bp	39.34	4.40	68.41
sw_10_scaffold_18643 Species: Pontibacter korlensis (50%)	2	1050 bp	41.24	5.24	76.29
sw_10_scaffold_5866 Species: Cecembia lonarensis (50%)	2	2251 bp	41.05	5.33	92.76
sw_10_scaffold_7709 Species: Flavobacterium aquatile (50%)	2	1902 bp	38.85	6.26	64.83
sw_10_scaffold_6558 Species: Belliella baltica (50%)	2	2103 bp	39.75	4.99	60.20
sw_10_scaffold_14062 Species: Haliscomenobacter hydrossis (50%)	2	1283 bp	37.72	5.30	75.76
sw_10_scaffold_18000 Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated (50%)	2	1077 bp	39.18	3.81	86.91
sw_10_scaffold_10838 Species: Sphingobacterium sp. ACCC 05744 (50%)	2	1522 bp	42.44	5.26	97.37
sw_10_scaffold_14524 Species: Aquimarina atlantica (50%)	2	1255 bp	43.35	5.26	100.88
sw_10_scaffold_20564 Species: Pedobacter glucosidilyticus (50%)	2	1808 bp	41.21	5.48	92.26
sw_10_scaffold_2694 Species: GWF2_Bacteroidetes_35_48_curated (50%)	2	3588 bp	40.77	5.18	87.88
sw_10_scaffold_5872 Species: Schleiferia thermophila (50%)	2	2974 bp	38.50	5.08	75.76
sw_10_scaffold_12454 Species: BJP_IG2103_Bacteroidetes_37_22 (50%)	2	1390 bp	40.43	6.19	98.42
sw_10_scaffold_17545 Species: Cecembia lonarensis (50%)	2	1099 bp	42.49	4.64	98.82
sw_10_scaffold_17315 Species: Croceibacter atlanticus (50%)	2	1108 bp	42.15	5.14	99.37
sw_10_scaffold_23655 Species: Fibrisoma limi (50%)	2	1421 bp	42.79	4.57	92.47

Displaying items 301-350 of 499 in total

SW_10_Bacteroidetes_40_5

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

SW_10_Bacteroidetes_40_5

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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