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SW_10_Bacteroidetes_40_5

In projects: SW_10

Consensus taxonomy: Bacteroidetes  →  Bacteria

Metagenomic Context

Parent: SW_10_UNK

Properties

Avg. coverage: 5.33 Longest contig: 11.36 Kbp Bin length: 1.08 Mbp GC content: 39.90 %
Contigs count: 499 Features count: 1322 rRNAs count: 0 tRNAs count: 9

Genome completeness

partial RP 37 / 55 MC: 5 BSCG 36 / 51 MC: 5 ASCG 8 / 38
Displaying items 351-400 of 499 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_10_scaffold_17319
Species: CG_Bacteroid_01 (50%)
2 1108 bp 39.53 3.97 93.41
sw_10_scaffold_9337
Species: GWA2_Bacteroidetes_31_9_curated (50%)
2 1673 bp 40.05 5.32 77.29
sw_10_scaffold_8417
Species: Flavobacteriales bacterium BRH_c54 (50%)
2 3272 bp 39.52 5.20 100.95
sw_10_scaffold_11311
Species: GWF2_Bacteroidetes_33_38_curated (50%)
2 1478 bp 38.77 4.13 81.60
sw_10_scaffold_7268
Species: Hymenobacter sp. APR13 (50%)
2 1971 bp 37.70 5.83 84.02
sw_10_scaffold_19378
Species: Solitalea canadensis (50%)
2 1020 bp 40.88 5.10 94.71
sw_10_scaffold_12004
Species: Marivirga tractuosa (50%)
2 1423 bp 41.25 5.34 88.55
sw_10_scaffold_14311
Species: Pedobacter glucosidilyticus (50%)
2 1268 bp 40.93 5.60 97.95
sw_10_scaffold_35211
Species: Solitalea canadensis (50%)
2 1174 bp 41.48 4.77 77.68
sw_10_scaffold_13395
Species: Saprospira grandis (50%)
2 1325 bp 40.08 4.30 98.04
sw_10_scaffold_19847
Species: Winogradskyella psychrotolerans (50%)
2 1001 bp 39.56 4.70 90.21
sw_10_scaffold_6125
Species: BJP_IG2103_Bacteroidetes_37_22 (50%)
2 2189 bp 40.38 4.93 74.42
sw_10_scaffold_10867
Species: Pontibacter korlensis (50%)
2 1519 bp 41.41 5.40 97.56
sw_10_scaffold_11789
Species: GWE2_Bacteroidetes_32_14_curated (50%)
2 1441 bp 39.28 4.93 82.03
sw_10_scaffold_16838
Species: R_Bacteroidetes_44_7 (50%)
2 1130 bp 39.82 3.98 52.30
sw_10_scaffold_10179
Species: Cesiribacter andamanensis (50%)
2 2347 bp 38.39 6.05 96.63
sw_10_scaffold_11792
Species: GWD2_Bacteroidetes_33_33_curated (50%)
2 1441 bp 41.50 5.90 99.72
sw_10_scaffold_6366
Species: Phaeodactylibacter xiamenensis (50%)
2 2600 bp 40.27 5.85 73.96
sw_10_scaffold_11333
Species: Muricauda ruestringensis (50%)
2 1476 bp 39.77 5.08 85.57
sw_10_scaffold_19168
Species: Rhodonellum psychrophilum (50%)
2 1576 bp 41.88 5.33 66.43
sw_10_scaffold_8210
Species: Flammeovirgaceae bacterium 311 (50%)
2 1824 bp 42.76 6.52 38.82
sw_10_scaffold_10643
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated (50%)
2 1541 bp 38.74 5.19 80.21
sw_10_scaffold_22754
Species: GWF2_Bacteroidetes_35_48_curated (50%)
2 2215 bp 41.67 5.82 89.80
sw_10_scaffold_12261
Species: Rhodothermus marinus (50%)
2 2208 bp 40.63 4.30 63.59
sw_10_scaffold_15029
Species: Flavobacteriales bacterium BRH_c54 (50%)
2 1225 bp 40.16 5.55 62.20
sw_10_scaffold_16390
Species: Echinicola vietnamensis (50%)
2 1153 bp 39.12 6.68 88.20
sw_10_scaffold_19177
Species: GWF2_Bacteroidetes_43_11_curated (50%)
2 1028 bp 39.79 4.18 100.68
sw_10_scaffold_15030
Species: Saprospira grandis (50%)
2 2450 bp 39.06 4.29 62.33
sw_10_scaffold_8452
Species: Hymenobacter sp. APR13 (50%)
2 1791 bp 41.65 4.24 83.42
sw_10_scaffold_7531
Species: Pedobacter kyungheensis (50%)
2 3043 bp 41.08 5.16 96.22
sw_10_scaffold_11807
Species: GWF2_Bacteroidetes_41_31_curated (50%)
2 1440 bp 42.43 5.56 60.21
sw_10_scaffold_11116
Species: Winogradskyella psychrotolerans (50%)
2 1496 bp 44.05 7.82 73.80
sw_10_scaffold_17590
Species: Runella slithyformis (50%)
2 1097 bp 41.11 5.29 95.44
sw_10_scaffold_16210
Species: Flexibacter litoralis (50%)
2 1162 bp 40.96 5.85 89.59
sw_10_scaffold_12504
Species: Niastella koreensis (50%)
2 1386 bp 39.11 6.28 85.50
sw_10_scaffold_14348
Species: Salinibacter ruber (50%)
2 1266 bp 39.18 4.50 92.65
sw_10_scaffold_16400
Species: Owenweeksia hongkongensis (50%)
2 1152 bp 38.19 4.86 47.14
sw_10_scaffold_10432
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 2018 bp 38.80 5.35 97.67
sw_10_scaffold_14122
Species: GWA2_Bacteroidetes_31_9_curated (50%)
2 1280 bp 39.06 5.00 89.77
sw_10_scaffold_14815
Species: Niastella koreensis (50%)
2 1238 bp 39.82 6.62 76.33
sw_10_scaffold_17832
Species: Sporocytophaga myxococcoides (50%)
2 1085 bp 41.20 3.59 64.15
sw_10_scaffold_7777
Species: Nonlabens sediminis (50%)
2 1892 bp 38.21 7.40 76.90
sw_10_scaffold_12283
Species: Pontibacter korlensis (50%)
2 1403 bp 39.63 5.63 60.30
sw_10_scaffold_7549
Species: Tannerella sp. CAG:118 (50%)
2 1924 bp 39.45 4.63 100.42
sw_10_scaffold_3897
Species: Owenweeksia hongkongensis (50%)
2 2905 bp 39.04 4.99 97.90
sw_10_scaffold_10903
Species: GWE2_Bacteroidetes_32_14_curated (50%)
2 2659 bp 40.50 3.95 91.50
sw_10_scaffold_17609
Species: Cytophaga hutchinsonii (50%)
2 1096 bp 39.60 5.84 94.71
sw_10_scaffold_6861
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated (100%)
2 2043 bp 42.29 6.61 99.71
sw_10_scaffold_10215
Species: GWA2_Bacteroidetes_32_17_curated (50%)
2 1583 bp 43.40 7.83 95.89
sw_10_scaffold_8938
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
2 1723 bp 40.28 5.46 80.79
Displaying items 351-400 of 499 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.