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SW_12_Halobacteriales_68_16

In projects: SW_12  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Displaying items 1-50 of 117 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_12_scaffold_6451
Species: Halorubrum kocurii (100%)
2 3429 bp 67.42 14.03 49.17
sw_12_scaffold_7244
Class: Halobacteria (57.14%)
7 4352 bp 68.96 12.96 67.97
sw_12_scaffold_16366
Order: Halobacteriales (66.67%)
3 3188 bp 66.62 11.54 70.29
sw_12_scaffold_624
Class: Halobacteria (92.31%)
13 13127 bp 68.64 14.95 71.79
sw_12_scaffold_4096
Order: Natrialbales (50%)
8 5686 bp 68.99 14.65 71.97
sw_12_scaffold_8509
Species: Halosimplex carlsbadense (66.67%)
9 4535 bp 66.17 16.03 71.97
sw_12_scaffold_6461
Class: Halobacteria (100%)
3 3049 bp 68.19 14.33 72.22
sw_12_scaffold_5252
Order: Halobacteriales (50%)
8 4149 bp 68.67 15.35 73.10
sw_12_scaffold_6463
Class: Halobacteria (100%)
5 5479 bp 70.05 17.96 73.54
sw_12_scaffold_17700
Class: Halobacteria (50%)
6 4196 bp 69.42 13.82 75.14
sw_12_scaffold_5218
Order: Halobacteriales (80%)
5 5168 bp 66.47 12.52 75.41
sw_12_scaffold_4402
Species: Halosimplex carlsbadense (60%)
10 8885 bp 67.21 17.84 76.17
sw_12_scaffold_3679
Order: Halobacteriales (61.54%)
13 10579 bp 68.80 17.18 76.60
sw_12_scaffold_3865
Order: Halobacteriales (60%)
10 10343 bp 68.17 14.44 76.78
sw_12_scaffold_7592
Order: Halobacteriales (80%)
5 4102 bp 70.04 15.89 76.79
sw_12_scaffold_1915
Order: Halobacteriales (60.87%)
23 19529 bp 68.23 17.42 76.90
sw_12_scaffold_3502
Order: Halobacteriales (53.33%)
15 11658 bp 67.48 13.74 76.97
sw_12_scaffold_5204
Class: Halobacteria (85.71%)
7 6789 bp 70.26 14.91 77.24
sw_12_scaffold_1659
Class: Halobacteria (83.33%)
12 10180 bp 65.97 12.84 77.27
sw_12_scaffold_11270
Species: Halosimplex carlsbadense (57.14%)
7 3379 bp 68.27 21.75 77.51
sw_12_scaffold_15946
Order: Halobacteriales (50%)
4 3116 bp 67.27 11.30 78.08
sw_12_scaffold_16232
Genus: Haloarcula (66.67%)
6 3360 bp 68.42 15.12 78.13
sw_12_scaffold_5631
Order: Natrialbales (50%)
6 3340 bp 67.01 12.57 78.68
sw_12_scaffold_7930
Species: Halosimplex carlsbadense (100%)
5 3001 bp 66.88 13.66 79.37
sw_12_scaffold_3542
Order: Natrialbales (60%)
5 4700 bp 69.45 14.77 79.53
sw_12_scaffold_4164
Species: Halosimplex carlsbadense (66.67%)
3 3075 bp 66.28 15.71 80.49
sw_12_scaffold_6617
Order: Halobacteriales (60%)
5 4224 bp 68.32 15.01 81.11
sw_12_scaffold_1234
Order: Halobacteriales (75%)
12 11081 bp 69.68 15.75 81.65
sw_12_scaffold_4910
Order: Halobacteriales (57.14%)
7 5746 bp 67.39 14.78 81.66
sw_12_scaffold_5859
Order: Halobacteriales (50%)
4 4167 bp 66.02 13.61 82.15
sw_12_scaffold_1327
Class: Halobacteria (85.71%)
7 6198 bp 69.64 17.84 82.19
sw_12_scaffold_2449
Class: Halobacteria (76.92%)
13 10575 bp 67.81 14.48 82.47
sw_12_scaffold_5861
Order: Natrialbales (66.67%)
6 3333 bp 67.27 21.12 82.63
sw_12_scaffold_6123
Class: Halobacteria (75%)
4 3521 bp 67.17 15.76 82.73
sw_12_scaffold_6388
Species: Halosimplex carlsbadense (75%)
4 3515 bp 67.00 13.14 82.87
sw_12_scaffold_1562
Class: Halobacteria (57.14%)
7 5283 bp 66.34 13.70 82.96
sw_12_scaffold_5034
Order: Natrialbales (50%)
6 4673 bp 68.59 18.51 83.01
sw_12_scaffold_12416
Order: Halobacteriales (60%)
5 3374 bp 69.95 14.97 83.22
sw_12_scaffold_4713
Order: Halobacteriales (53.85%)
13 10932 bp 69.52 15.06 83.32
sw_12_scaffold_9734
Order: Halobacteriales (57.14%)
7 3417 bp 69.59 17.47 83.49
sw_12_scaffold_2882
Order: Halobacteriales (66.67%)
6 5172 bp 68.50 15.22 83.53
sw_12_scaffold_4752
Class: Halobacteria (71.43%)
7 3552 bp 67.12 10.95 83.61
sw_12_scaffold_5273
Order: Halobacteriales (80%)
5 4463 bp 66.55 15.03 83.69
sw_12_scaffold_9856
Species: Halosimplex carlsbadense (50%)
4 3113 bp 67.36 21.94 83.75
sw_12_scaffold_1594
Order: Halobacteriales (61.54%)
13 9780 bp 67.21 16.20 83.93
sw_12_scaffold_6945
Order: Halobacteriales (66.67%)
3 3279 bp 66.73 28.09 83.99
sw_12_scaffold_4033
Class: Halobacteria (87.5%)
8 5793 bp 68.89 17.30 84.26
sw_12_scaffold_3064
Species: Halosimplex carlsbadense (100%)
3 3689 bp 67.71 24.51 84.58
sw_12_scaffold_6375
Class: Halobacteria (100%)
5 5433 bp 69.15 14.63 84.59
sw_12_scaffold_9758
Order: Haloferacales (66.67%)
3 3590 bp 69.11 14.48 84.65
Displaying items 1-50 of 117 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.