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SW_12_Halobacteriales_68_16

In projects: SW_12  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Displaying items 1-50 of 117 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_12_scaffold_7753
Order: Halobacteriales (50%)
8 3188 bp 68.82 22.55 99.94
sw_12_scaffold_1290
Order: Halobacteriales (50%)
4 6652 bp 69.26 15.81 99.76
sw_12_scaffold_3700
Order: Halobacteriales (50%)
4 3296 bp 69.66 14.05 99.12
sw_12_scaffold_4763
Species: Halosimplex carlsbadense (86.67%)
15 6983 bp 66.76 24.24 98.42
sw_12_scaffold_1563
Class: Halobacteria (80%)
5 5281 bp 65.95 17.33 98.16
sw_12_scaffold_8296
Order: Haloferacales (50%)
4 4467 bp 69.11 17.71 97.72
sw_12_scaffold_4253
Species: Halosimplex carlsbadense (75%)
4 3034 bp 67.80 15.72 97.69
sw_12_scaffold_3296
Order: Natrialbales (66.67%)
3 3533 bp 69.80 15.00 96.21
sw_12_scaffold_3478
Order: Halobacteriales (100%)
5 3423 bp 69.73 14.14 95.62
sw_12_scaffold_2836
Class: Halobacteria (75%)
4 4681 bp 67.70 16.66 95.43
sw_12_scaffold_4677
Order: Halobacteriales (83.33%)
6 4945 bp 69.85 16.32 95.37
sw_12_scaffold_8848
Species: Halosimplex carlsbadense (80%)
5 3568 bp 66.93 15.44 95.35
sw_12_scaffold_5463
Species: Halosimplex carlsbadense (75%)
4 3192 bp 68.48 14.63 94.45
sw_12_scaffold_5925
Order: Natrialbales (50%)
4 3305 bp 69.59 14.40 94.13
sw_12_scaffold_2248
Species: Natrinema pellirubrum (50%)
2 4358 bp 68.63 12.53 94.03
sw_12_scaffold_2192
Class: Halobacteria (57.14%)
7 8407 bp 66.31 14.17 93.96
sw_12_scaffold_2545
Species: Halosimplex carlsbadense (100%)
3 4075 bp 66.82 18.77 93.94
sw_12_scaffold_3086
Species: Halosimplex carlsbadense (91.67%)
12 6691 bp 67.69 15.72 93.75
sw_12_scaffold_4066
Species: Halosimplex carlsbadense (75%)
4 3116 bp 68.49 17.30 93.58
sw_12_scaffold_4064
Genus: Haloarcula (100%)
3 3116 bp 66.14 20.06 93.49
sw_12_scaffold_3176
Order: Halobacteriales (66.67%)
3 3611 bp 67.16 16.12 93.38
sw_12_scaffold_14264
Species: Halosimplex carlsbadense (100%)
4 3177 bp 67.96 21.28 93.30
sw_12_scaffold_3510
Species: Halosimplex carlsbadense (50%)
4 4484 bp 67.06 14.12 92.86
sw_12_scaffold_4286
Class: Halobacteria (100%)
3 3022 bp 66.74 21.81 92.52
sw_12_scaffold_5733
Order: Halobacteriales (75%)
4 3087 bp 69.32 15.84 92.42
sw_12_scaffold_2291
Class: Halobacteria (71.43%)
7 5131 bp 67.43 22.82 92.26
sw_12_scaffold_1246
Class: Halobacteria (76.92%)
13 11546 bp 67.62 17.01 92.08
sw_12_scaffold_2606
Order: Halobacteriales (60%)
5 4029 bp 68.11 15.44 91.81
sw_12_scaffold_4193
Species: Halosimplex carlsbadense (100%)
3 3063 bp 67.19 14.76 91.58
sw_12_scaffold_4312
Species: Natronococcus occultus (50%)
2 3014 bp 67.15 18.58 91.17
sw_12_scaffold_4102
Class: Halobacteria (60%)
5 4144 bp 68.32 19.33 91.14
sw_12_scaffold_8545
Species: Halosimplex carlsbadense (100%)
3 3009 bp 67.80 15.22 91.03
sw_12_scaffold_3076
Order: Halobacteriales (50%)
12 5939 bp 67.25 16.97 91.03
sw_12_scaffold_2653
Order: Halobacteriales (57.14%)
7 3994 bp 68.35 14.92 90.89
sw_12_scaffold_9844
Species: Halosimplex carlsbadense (80%)
5 3094 bp 68.42 17.26 90.66
sw_12_scaffold_2507
Species: Halosimplex carlsbadense (75%)
4 4567 bp 68.29 15.94 90.19
sw_12_scaffold_2270
Order: Natrialbales (57.14%)
7 5646 bp 68.90 14.79 90.17
sw_12_scaffold_5503
Order: Halobacteriales (80%)
5 3643 bp 69.15 12.90 90.09
sw_12_scaffold_3816
Order: Halobacteriales (80%)
5 4237 bp 68.30 17.02 89.99
sw_12_scaffold_7493
Order: Halobacteriales (85.71%)
7 3133 bp 68.91 14.40 89.88
sw_12_scaffold_3470
Order: Halobacteriales (80%)
5 4206 bp 68.14 16.81 89.73
sw_12_scaffold_14657
Order: Halobacteriales (50%)
6 3456 bp 69.13 16.44 89.70
sw_12_scaffold_8026
Species: Halosimplex carlsbadense (66.67%)
3 3090 bp 66.86 19.06 89.42
sw_12_scaffold_4457
Order: Natrialbales (80%)
5 4060 bp 69.29 15.59 88.82
sw_12_scaffold_4660
Species: Halosimplex carlsbadense (80%)
5 3200 bp 68.13 16.00 88.59
sw_12_scaffold_2611
Class: Halobacteria (66.67%)
6 6671 bp 69.23 16.29 88.59
sw_12_scaffold_7987
Order: Halobacteriales (83.33%)
6 4053 bp 66.22 20.03 88.45
sw_12_scaffold_1710
Class: Halobacteria (88.24%)
17 12355 bp 67.36 13.39 88.31
sw_12_scaffold_3139
Order: Halobacteriales (66.67%)
6 3637 bp 68.63 12.73 88.26
sw_12_scaffold_7162
Class: Halobacteria (72.73%)
11 6662 bp 68.87 15.21 88.17
Displaying items 1-50 of 117 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.