ggKbase home page

sw_4_scaffold_15_19

Organism: SW_4_Oscillatoriophycideae_48_29

near complete RP 48 / 55 MC: 2 BSCG 49 / 51 ASCG 11 / 38
Location: 16656..17519

Top 3 Functional Annotations

Value Algorithm Source
Phycocyanin-associated rod linker protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YJ99_LYNSP similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 283.0
  • Bit_score: 405
  • Evalue 4.90e-110
Photosystem I reaction center subunit XII {ECO:0000313|EMBL:KKD34555.1}; TaxID=1637645 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robu similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 282.0
  • Bit_score: 408
  • Evalue 6.20e-111
Phycobilisome linker polypeptide similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 287.0
  • Bit_score: 395
  • Evalue 1.40e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Limnoraphis robusta → Limnoraphis → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGAGCGGTTTAGTAGCAGCGAATTTAGCAGAAGCAAGGCAGTTGGGGATTGAGCCGTTTGATGCAACTAAGGTAGAGCTGCGACCGGATTGGGGTGAAGATGACCTACAAGCAATAATCAGAGCAGCCTACACTCAGGTACTCGGCAATGATTACGTCATGCAATCGGAGCGTCTCACCTCGGCGGAGTCTCTGCTGCGGCAAGGAAACATCACCGTCCGAGACTTTATCCGTTCCATCGCCAAGTCGGATTTATACAAATCCAAGTTTTTCTATCCCACTTCCAATCAACGCTTTGTAGAACTGAATTTCAAGCATTTGTTAGGTCGCCCTCCTTATGATGAGCAGGAGTGGGCTTACCACACCCGCCTTTGTGAGGATAAGGGCTACGATGCTGAAATTGATTCTTACTTTGAAAGCAAGGAGTACGAAAATAAGTTTGGTGACAACATTGTTCCCTACTACTCCGGCTTTCTGGTGAATCAAGGATCAAGAACGGTAGGTTTTACCCGGATGTTCCAACTGTATCGGGGTTATGCCAACAATGATGGCGGTCAAATCGGAAGCAAAGGGGCACAACTTACCAGCGAACTTGCAAAAAATCAAGCCTCTAGCATTGTCAAGCCCACTGGTGTTAGCCGCAGAGCAAAGACGGAAACGCCCAAGACCTCTTATGGTGGGGTGAGCAATGAAACGGAGCGAGTTTATCGCATCGAGGTGACTGGTTTAATTGGTCGTTCAGTTCGCACTTCTAATGTCCGTCAAAGTAACGATGCCGTCTTAGTGCCCTACGACCAGCTTTCTGAACGGATACAGCAAATTGTGCGCCGGGGTGGTAAAATTATCAGCGTCAGACCAGCTTAA
PROTEIN sequence
Length: 288
MSGLVAANLAEARQLGIEPFDATKVELRPDWGEDDLQAIIRAAYTQVLGNDYVMQSERLTSAESLLRQGNITVRDFIRSIAKSDLYKSKFFYPTSNQRFVELNFKHLLGRPPYDEQEWAYHTRLCEDKGYDAEIDSYFESKEYENKFGDNIVPYYSGFLVNQGSRTVGFTRMFQLYRGYANNDGGQIGSKGAQLTSELAKNQASSIVKPTGVSRRAKTETPKTSYGGVSNETERVYRIEVTGLIGRSVRTSNVRQSNDAVLVPYDQLSERIQQIVRRGGKIISVRPA*