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sw_4_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
sw_4_scaffold_15_1
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

519..998
-----------------
DNA (480bp)
protein (160aa)
Recombinase family protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QH16_9CYAN
recombinase
sw_4_scaffold_15_2
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1208..1495
-----------------
DNA (288bp)
protein (96aa)
Recombinase n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G302_9CYAN
recombinase
sw_4_scaffold_15_3
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1446..1979)
-----------------
DNA (534bp)
protein (178aa)
Transposase family protein n=1 Tax=Microcystis aeruginosa DIANCHI905 RepID=L8NZG8_MICAE
putative transposase
sw_4_scaffold_15_4
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(2725..3411)
-----------------
DNA (687bp)
protein (229aa)
Magnesium protoporphyrin O-methyltransferase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T680_9CYAN
magnesium protoporphyrin O-methyltransferase
sw_4_scaffold_15_5
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3436..3978)
-----------------
DNA (543bp)
protein (181aa)
sodC; Cu,Zn superoxide dismutase (SOD), periplasmic (EC:1.15.1.1)
Cu,Zn superoxide dismutase (SOD), periplasmic n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W949_UNCMA
sw_4_scaffold_15_6
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4065..5261)
-----------------
DNA (1197bp)
protein (399aa)
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WKG3_9CYAN
sw_4_scaffold_15_7
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5902..7053)
-----------------
DNA (1152bp)
protein (384aa)
5-(Carboxyamino)imidazole ribonucleotide synthase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WBE4_9CYAN
5-(carboxyamino)imidazole ribonucleotide synthase
sw_4_scaffold_15_8
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7044..7547)
-----------------
DNA (504bp)
protein (168aa)
Putative low-complexity protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W9P5_9CYAN
low-complexity protein
sw_4_scaffold_15_9
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7713..8291)
-----------------
DNA (579bp)
protein (193aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YC71_HALP7
short-chain dehydrogenase/reductase SDR
sw_4_scaffold_15_10
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9157..10107
-----------------
DNA (951bp)
protein (317aa)
Pseudouridine synthase n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U8Z4_CYAP2
RluA family pseudouridine synthase
sw_4_scaffold_15_11
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10312..11082)
-----------------
DNA (771bp)
protein (257aa)
Phycobilisome linker polypeptide n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y8U4_HALP7
Phycobilisome linker polypeptide
sw_4_scaffold_15_12
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(11268..11876)
-----------------
DNA (609bp)
protein (203aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0003169B66
phycobilin lyase, CpcS-I subunit
sw_4_scaffold_15_13
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12021..12683)
-----------------
DNA (663bp)
protein (221aa)
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XQU3_9CYAN
hypothetical protein
sw_4_scaffold_15_14
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12771..13337)
-----------------
DNA (567bp)
protein (189aa)
Chromophore lyase CpcS/CpeS n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YFQ9_HALP7
hypothetical protein
sw_4_scaffold_15_15
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13696..13932)
-----------------
DNA (237bp)
protein (79aa)
Uncharacterized protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YSK7_DACSA
hypothetical protein
sw_4_scaffold_15_16
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

14494..15012
-----------------
DNA (519bp)
protein (173aa)
Phycocyanin, beta subunit n=2 Tax=Chroococcales RepID=K9XKJ2_9CHRO
phycocyanin, beta subunit
sw_4_scaffold_15_17
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15085..15573
-----------------
DNA (489bp)
protein (163aa)
Phycocyanin, alpha subunit n=2 Tax=Chroococcales RepID=K9XMZ0_9CHRO
phycocyanin, alpha subunit
sw_4_scaffold_15_18
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15697..16560
-----------------
DNA (864bp)
protein (288aa)
Phycobilisome linker polypeptide n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YGV4_HALP7
Phycobilisome linker polypeptide
sw_4_scaffold_15_19
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16656..17519
-----------------
DNA (864bp)
protein (288aa)
Phycocyanin-associated rod linker protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YJ99_LYNSP
Phycobilisome linker polypeptide
sw_4_scaffold_15_20
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17621..17959
-----------------
DNA (339bp)
protein (113aa)
CpcD/allophycocyanin linker domain protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KVC0_9SYNC
CpcD phycobilisome linker domain protein
sw_4_scaffold_15_21
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

17966..18769
-----------------
DNA (804bp)
protein (268aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0002DF9E61
PBS lyase HEAT-like repeat protein
sw_4_scaffold_15_22
unknown

Not on your lists

18955..19095
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

sw_4_scaffold_15_23
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

19192..19833
-----------------
DNA (642bp)
protein (214aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00036B20F3
PBS lyase HEAT-like repeat protein
sw_4_scaffold_15_24
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(19851..21362)
-----------------
DNA (1512bp)
protein (504aa)
Na+/proline symporter n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8M1M6_9CYAN
Na+/solute symporter
sw_4_scaffold_15_25
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21749..22900)
-----------------
DNA (1152bp)
protein (384aa)
Glycerol dehydrogenase-like oxidoreductase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WJ25_9CYAN
glycerol dehydrogenase
sw_4_scaffold_15_26
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(22984..23508)
-----------------
DNA (525bp)
protein (175aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YGN3_HALP7
hypothetical protein
sw_4_scaffold_15_27
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

23780..24463
-----------------
DNA (684bp)
protein (228aa)
Uncharacterized protein n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RLQ1_9CYAN
hypothetical protein
sw_4_scaffold_15_28
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24848..26023)
-----------------
DNA (1176bp)
protein (392aa)
Cell cycle protein, FtsW/RodA/SpoVE family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VSM8_9CYAN
cell division membrane protein
sw_4_scaffold_15_29
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(26144..26347)
-----------------
DNA (204bp)
protein (68aa)
Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W066_9CYAN
phycobilisome core linker protein
sw_4_scaffold_15_30
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(26626..27111)
-----------------
DNA (486bp)
protein (162aa)
Allophycocyanin, beta subunit n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YDM9_HALP7
allophycocyanin subunit beta
Displaying items 1-30 of 55 in total

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