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sw_4_scaffold_15_20

Organism: SW_4_Oscillatoriophycideae_48_29

near complete RP 48 / 55 MC: 2 BSCG 49 / 51 ASCG 11 / 38
Location: 17621..17959

Top 3 Functional Annotations

Value Algorithm Source
CpcD/allophycocyanin linker domain protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KVC0_9SYNC similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 109.0
  • Bit_score: 147
  • Evalue 9.50e-33
CpcD phycobilisome linker domain protein similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 108.0
  • Bit_score: 146
  • Evalue 4.50e-33
CpcD phycobilisome linker domain protein {ECO:0000313|EMBL:AFZ33040.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7 similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 108.0
  • Bit_score: 146
  • Evalue 2.30e-32

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Taxonomy

Gloeocapsa sp. PCC 7428 → Gloeocapsa → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGTTTGGTCAAACGGCACTCGGAAGCAAAACGCTTAGTGATTCCGCTAATCGCATGTTTCGCATTGAAGTCGAAGGGATGCGTCAAAATAGAGAAGCGGATGAACTCAACTATCCCATTCGCAGTAGCGGCAGCATCTATATCACGGTGCCTTATAGTCGCATGAGTGAACAGATGCAGCGGATTAACCGCATGGGGGGCAAGATTGTTAGCATCGAGCCTTTGACCCTAGAAGGGGAAAGCCAACCCAAAATGGAAGCAACGGCAGCCCAGCAAGACCTAGAGGCAGAAGGCAAACCTAAAACTATAGGCAAACAGAAGCAAAAATCGGACAGTTAG
PROTEIN sequence
Length: 113
MFGQTALGSKTLSDSANRMFRIEVEGMRQNREADELNYPIRSSGSIYITVPYSRMSEQMQRINRMGGKIVSIEPLTLEGESQPKMEATAAQQDLEAEGKPKTIGKQKQKSDS*