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sw_4_scaffold_4149_1

Organism: SW_4_Parcubacteria_46_8

partial RP 33 / 55 MC: 1 BSCG 35 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(2..547)

Top 3 Functional Annotations

Value Algorithm Source
putative type II secretion system protein E Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_11_44_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 182.0
  • Bit_score: 293
  • Evalue 1.90e-76
general secretion pathway protein E id=5803081 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 182.0
  • Bit_score: 279
  • Evalue 3.40e-72
type IV-A pilus assembly ATPase PilB similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 182.0
  • Bit_score: 233
  • Evalue 6.00e-59

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Taxonomy

R_RIF_OD1_11_44_35 → RIF-OD1-11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 546
GTGGATTTTCGTGTCTCAACATTTCCAACATATTATGGAGAGAAAGTAGTCATGCGACTCCTTGATCCGGAGCAAGGAGATATTCCGCTAGAGGAGCTGGGGATGACAAAACGCAATTATAACCTTGTGAAAGATGCGATTACCCAGCCACATGGGATGATACTTATATCCGGTCCGACCGGTTCGGGAAAGACAACTACTCTTTACTCAATGCTGAAGGATGTTGATACAGACACGCAGAATGTCTTAAGTCTTGAGGATCCGGTAGAATATAAAGTACCGGGGATAAACCAGTCACAGGTGCAACCGGAGATCGGGTATACATTCGCTAATGGATTGCGCACGACATTACGGCAAGACCCGGATATTATCATGGTCGGTGAGATTCGTGACGAGGAGACGGCCGGTTTGGCAATTCAGGCCGCACTTACTGGTCACTTAGTGATGTCTACTATTCACACGAACAGTGCCGCGGGTATCATACCACGCTTGATTGATATGGGAGTGGATCCGTACTTAATTCCGCCCACACTTGTGTTAGGTATT
PROTEIN sequence
Length: 182
VDFRVSTFPTYYGEKVVMRLLDPEQGDIPLEELGMTKRNYNLVKDAITQPHGMILISGPTGSGKTTTLYSMLKDVDTDTQNVLSLEDPVEYKVPGINQSQVQPEIGYTFANGLRTTLRQDPDIIMVGEIRDEETAGLAIQAALTGHLVMSTIHTNSAAGIIPRLIDMGVDPYLIPPTLVLGI