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sw_4_scaffold_4149_2

Organism: SW_4_Parcubacteria_46_8

partial RP 33 / 55 MC: 1 BSCG 35 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: comp(499..1395)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E Tax=GWB1_OD1_44_7 similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 287.0
  • Bit_score: 271
  • Evalue 1.60e-69
general secretion pathway protein E id=5803081 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 286.0
  • Bit_score: 252
  • Evalue 7.20e-64
type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 271.0
  • Bit_score: 161
  • Evalue 2.80e-37

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Taxonomy

GWB1_OD1_44_7 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGGATTATCTTCTAGAGTTCTCAAAGAAAGATATCGTATCCAAGGATGTCCTTGAGACGGTTCGTAAGGAAAAACGAAAGGAAGATGAAGCACTCGATGCAATTCTTCAAAAACACGGCATTGCAAGAGAGCAAATCCTTTCAGTCAAAAGTGACTACTATGGCGTACCAAGTATTGATATAGCGAATACGTCTATACCACACCAAACATTGCAAGTTATTCCGCAAGAGTCATCAAGGCACTACAAAATTATTCCGCTGGAAGTAAATGATGATACGCTGGAAGTAGGCTTTGTGGACCCTGATAACCGACAAGCGCTCGATGCCGTACAATTTATAGCCAACAAGCGCAACTTGACGATCGAGAAGTATGTCATCACCGAGAGTGATTTTCGTGAGCGGTTTGAGGATTATGAAAGTCTGTCAGGTGAGGTGTCACAGGCGCTTGATGATCTTGAAACAGAACTTTCATCTGAAGAAAAGCAAGTATCTGAAGATATTGAGGCAATATCAGAAGAGTCGGATGAGGCTGTAAAAGAAGACGAGGACGGAAAGAAAAGAATTGTCGAGGATGCGCCGGTGACCAAGATTGTTGCAACGATATTGCAGTATGCAACCGAAGGCGGTGCCTCGGATGTGCATATCGAGCCAATGGAAGAGCGGATACGGGTCCGCTTTCGTGTTAGTGGCACATTACATACCTCACTGCAGCTTCCAACCAGTGTGAAAAGTGCGGTAGTTGCGCGAATAAAAATCCTCTCAGAGCTGAAGCTGGATGAGCGCCGGAAGCCACAAGACGGACGTTTTTCTGCTCATATTCAAGGTCGAAAAGTATTCAGGGTCGAAAGGTGGATTTTCGTGTCTCAACATTTCCAACATATTATGGAGAGAAAGTAG
PROTEIN sequence
Length: 299
MDYLLEFSKKDIVSKDVLETVRKEKRKEDEALDAILQKHGIAREQILSVKSDYYGVPSIDIANTSIPHQTLQVIPQESSRHYKIIPLEVNDDTLEVGFVDPDNRQALDAVQFIANKRNLTIEKYVITESDFRERFEDYESLSGEVSQALDDLETELSSEEKQVSEDIEAISEESDEAVKEDEDGKKRIVEDAPVTKIVATILQYATEGGASDVHIEPMEERIRVRFRVSGTLHTSLQLPTSVKSAVVARIKILSELKLDERRKPQDGRFSAHIQGRKVFRVERWIFVSQHFQHIMERK*