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sw_4_scaffold_4149

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Displaying 8 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_4149_1
R_RIF_OD1_11_44_35, RIF-OD1-11, Parcubacteria, Bacteria

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comp(2..547)
DNA (546bp) protein (182aa)
putative type II secretion system protein E Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_11_44_35_curated
general secretion pathway protein E id=5803081 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type IV-A pilus assembly ATPase PilB
sw_4_scaffold_4149_2
GWB1_OD1_44_7, Parcubacteria, Bacteria

Not on your lists

comp(499..1395)
DNA (897bp) protein (299aa)
type II secretion system protein E Tax=GWB1_OD1_44_7
general secretion pathway protein E id=5803081 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type IV pilus assembly protein PilB
sw_4_scaffold_4149_3
unknown

Not on your lists

comp(1412..1870)
DNA (459bp) protein (153aa)

This feature has no annotations

sw_4_scaffold_4149_4
RIFOXYC1_FULL_OD1_Adlerbacteria_48_26_curated, Adlerbacteria, Parcubacteria, Bacteria

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comp(2427..3032)
DNA (606bp) protein (202aa)
transmembrane_regions Tax=RIFOXYC1_FULL_OD1_Adlerbacteria_48_26_curated
transmembrane_regions id=5803084 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
sw_4_scaffold_4149_5
R_OD1_Kaiserbacteria_49_11, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3105..4220)
DNA (1116bp) protein (372aa)
Type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_49_11_curated
Type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=5803086 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type IV pilus assembly protein PilM
sw_4_scaffold_4149_6
GWC1_OD1_35_31, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

4286..4939
DNA (654bp) protein (218aa)
competence protein F; K02242 competence protein ComFC id=5803087 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Competence protein F {ECO:0000313|EMBL:KKP77224.1}; TaxID=1618629 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Campbellbacteria) bacterium GW2011_GWC1_35_31.;"
phosphoribosyltransferase
sw_4_scaffold_4149_7
unknown

Not on your lists

4974..5063
DNA (90bp) protein (30aa)

This feature has no annotations

sw_4_scaffold_4149_trna_1
unknown

Not on your lists

4976..5063
DNA (88bp)
transferRNA
Displaying 8 items

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