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SW_4_Halosimplex_carlsbadense_69_24

In projects: SW_4  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halosimplex carlsbadense  →  Halosimplex  →  Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Displaying items 151-175 of 175 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_4_scaffold_2080
Order: Haloferacales (57.14%)
7 7852 bp 67.42 24.02 84.09
sw_4_scaffold_3042
Order: Halobacteriales (53.85%)
13 7876 bp 66.71 23.94 77.74
sw_4_scaffold_1868
Class: Halobacteria (71.43%)
7 7920 bp 64.75 18.84 92.21
sw_4_scaffold_8428
Order: Halobacteriales (57.14%)
7 8164 bp 70.26 23.74 89.44
sw_4_scaffold_666
Species: Halosimplex carlsbadense (87.5%)
8 8253 bp 70.00 24.79 93.82
sw_4_scaffold_1218
Species: Halosimplex carlsbadense (50%)
16 8361 bp 67.56 30.94 82.19
sw_4_scaffold_2487
Species: Halosimplex carlsbadense (50%)
10 8742 bp 66.69 22.05 83.73
sw_4_scaffold_4790
Class: Halobacteria (70%)
10 8753 bp 69.28 23.04 92.03
sw_4_scaffold_5997
Species: Halosimplex carlsbadense (75%)
8 8762 bp 67.50 21.64 84.60
sw_4_scaffold_4609
Class: Halobacteria (77.78%)
9 8935 bp 68.94 22.87 91.29
sw_4_scaffold_808
Species: Halosimplex carlsbadense (71.43%)
7 9074 bp 68.12 29.92 74.69
sw_4_scaffold_478
Order: Halobacteriales (90%)
10 9404 bp 68.49 29.83 91.88
sw_4_scaffold_4264
Species: Halosimplex carlsbadense (60%)
10 9406 bp 68.95 25.32 66.15
sw_4_scaffold_1858
Order: Natrialbales (50%)
8 9407 bp 68.86 21.53 87.57
sw_4_scaffold_5977
Order: Halobacteriales (61.54%)
13 9550 bp 69.03 22.25 91.92
sw_4_scaffold_1023
Class: Halobacteria (81.82%)
11 9729 bp 66.96 20.99 88.10
sw_4_scaffold_428
Species: Halosimplex carlsbadense (66.67%)
6 10094 bp 65.94 30.03 94.13
sw_4_scaffold_1105
Order: Halobacteriales (71.43%)
7 10112 bp 69.24 23.02 76.63
sw_4_scaffold_1370
Species: Halosimplex carlsbadense (66.67%)
12 10587 bp 69.05 26.02 85.52
sw_4_scaffold_1013
Species: Halosimplex carlsbadense (50%)
14 11377 bp 70.50 27.47 82.95
sw_4_scaffold_757
Species: Halosimplex carlsbadense (61.9%)
21 11930 bp 69.09 33.09 91.48
sw_4_scaffold_1317
Class: Halobacteria (64.29%)
14 12895 bp 68.30 22.14 83.17
sw_4_scaffold_275
Genus: Haloarcula (53.33%)
15 12923 bp 68.44 22.97 92.95
sw_4_scaffold_565
Order: Halobacteriales (58.33%)
12 13103 bp 67.38 23.16 84.14
sw_4_scaffold_904
Order: Halobacteriales (58.82%)
17 15882 bp 70.15 26.45 92.20
Displaying items 151-175 of 175 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.