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sw_5_scaffold_1123

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1123_1
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1..144)
DNA (144bp) protein (48aa)
CopG family transcriptional regulator n=1 Tax=haloarchaeon 3A1_DGR RepID=T0STJ8_9EURY
ribbon-helix-helix CopG family protein
Ribbon-helix-helix CopG family protein {ECO:0000313|EMBL:ELZ90242.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurif
sw_5_scaffold_1123_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(222..1052)
DNA (831bp) protein (277aa)
nadE; NAD(+) synthase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=1210908 species=
NH(3)-dependent NAD(+) synthetase n=1 Tax=Halogranum salarium B-1 RepID=J2ZC41_9EURY
sw_5_scaffold_1123_trna_1
unknown

Not on your lists

1455..1525
DNA (71bp)
transferRNA
sw_5_scaffold_1123_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1570..1941)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNX5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93628.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_5_scaffold_1123_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1972..2598)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBK0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54943.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_5_scaffold_1123_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2762..3991)
DNA (1230bp) protein (410aa)
Sulfate transporter family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INK2_NATPD
transporter ( substrate sulfate)
Sulfate permease family protein {ECO:0000313|EMBL:CAI50301.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
sw_5_scaffold_1123_6

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comp(3996..4871)
DNA (876bp) protein (292aa)
2-keto-3-deoxy-phosphogluconate aldolase {ECO:0000313|EMBL:ESS03750.1}; EC=4.1.2.14 {ECO:0000313|EMBL:ESS03750.1};; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon
2-keto-3-deoxy-phosphogluconate aldolase n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZMP5_9ARCH
dihydrodipicolinate synthase/n-acetylneuraminate lyase
sw_5_scaffold_1123_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5319..5972)
DNA (654bp) protein (218aa)
TrkA-N domain protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6D0Q5_9EURY
TrkA-N domain protein
TrkA-N domain protein {ECO:0000313|EMBL:CCQ33633.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.
sw_5_scaffold_1123_8
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6117..7148
DNA (1032bp) protein (344aa)
Aldo/keto reductase n=1 Tax=Halobacterium sp. DL1 RepID=G4IEH2_9EURY
General stress protein {ECO:0000313|EMBL:AHG04755.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
oxidoreductase (aldo-keto reductase family protein)
sw_5_scaffold_1123_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7304..9265)
DNA (1962bp) protein (654aa)
UPF0447 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN90_NATM8
UPF0447 family protein
Heme-binding protein HemQ {ECO:0000313|EMBL:CCQ35371.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_5_scaffold_1123_10
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9753..10904
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RB04_HALMT
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFK21414.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_5_scaffold_1123_11
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10982..11812
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RB03_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK21413.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_5_scaffold_1123_12
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11915..13696)
DNA (1782bp) protein (594aa)
M50 metallopeptidase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L8T1_HALJP
M50 metallopeptidase {ECO:0000313|EMBL:EMA28889.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;
M50 metallopeptidase
sw_5_scaffold_1123_13
unknown

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13993..14463
DNA (471bp) protein (157aa)

This feature has no annotations

sw_5_scaffold_1123_14
unknown

Not on your lists

14711..15151
DNA (441bp) protein (147aa)

This feature has no annotations

sw_5_scaffold_1123_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15211..15660
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D120_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29206.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_1123_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15662..16138)
DNA (477bp) protein (159aa)
GCN5-related N-acetyltransferase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ30_HALMD
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACV46716.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mu
sw_5_scaffold_1123_17
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16135..16710)
DNA (576bp) protein (192aa)
Isochorismatase hydrolase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RV06_HALTV
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:ADB59299.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (str
sw_5_scaffold_1123_18
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16789..18243
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MRV2_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA48356.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_5_scaffold_1123_19

Not on your lists

18246..19538
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MLM7_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN05630.1}; Flags: Precursor;; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_1123_20
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19569..20711
DNA (1143bp) protein (381aa)
Nicotinate phosphoribosyltransferase {ECO:0000313|EMBL:EMA33908.1}; EC=6.3.4.21 {ECO:0000313|EMBL:EMA33908.1};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LLE9_HALJP
Displaying 21 items

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