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SW_5_Halobacteriales_68_49

In projects: SW_5  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: SW_5_UNK

Properties

Avg. coverage: 48.65 Longest contig: 82.96 Kbp Bin length: 2.07 Mbp GC content: 67.56 %
Contigs count: 151 Features count: 2438 rRNAs count: 0 tRNAs count: 38

Genome completeness

near complete RP 16 / 55 MC: 2 BSCG 13 / 51 MC: 2 ASCG 35 / 38 MC: 2
Displaying items 1-50 of 151 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_5_scaffold_223
Order: Halobacteriales (53.47%)
101 82958 bp 67.91 46.30 89.67
sw_5_scaffold_193
Order: Halobacteriales (51.04%)
96 73645 bp 67.00 40.43 87.19
sw_5_scaffold_553
Order: Halobacteriales (53.33%)
75 68328 bp 66.47 44.23 85.24
sw_5_scaffold_312
Class: Halobacteria (79.37%)
63 51631 bp 66.50 48.64 86.33
sw_5_scaffold_250
Order: Halobacteriales (63.46%)
52 37938 bp 68.13 52.42 88.38
sw_5_scaffold_379
Class: Halobacteria (84.31%)
51 51724 bp 68.33 50.61 91.91
sw_5_scaffold_68
Order: Halobacteriales (59.18%)
49 37775 bp 67.07 47.20 90.80
sw_5_scaffold_646
Order: Halobacteriales (57.45%)
47 43585 bp 67.43 48.79 86.01
sw_5_scaffold_145
Order: Halobacteriales (56.52%)
46 41230 bp 67.53 49.88 88.15
sw_5_scaffold_122
Class: Halobacteria (82.22%)
45 43094 bp 68.18 48.56 88.53
sw_5_scaffold_184
Order: Halobacteriales (63.41%)
41 32812 bp 68.29 47.40 88.50
sw_5_scaffold_667
Order: Halobacteriales (56.1%)
41 39689 bp 68.33 49.59 89.32
sw_5_scaffold_76
Order: Halobacteriales (52.5%)
40 35151 bp 68.80 47.44 89.08
sw_5_scaffold_318
Order: Halobacteriales (51.43%)
35 24001 bp 67.66 48.48 86.55
sw_5_scaffold_437
Order: Halobacteriales (60%)
35 29324 bp 67.72 50.60 87.40
sw_5_scaffold_642
Order: Halobacteriales (57.14%)
35 25673 bp 68.14 49.24 87.75
sw_5_scaffold_484
Order: Halobacteriales (54.29%)
35 29099 bp 67.83 47.58 91.10
sw_5_scaffold_509
Order: Halobacteriales (72.73%)
33 27943 bp 67.00 49.30 88.26
sw_5_scaffold_1460
Order: Halobacteriales (61.29%)
31 23745 bp 68.04 54.64 86.29
sw_5_scaffold_583
Class: Halobacteria (67.86%)
28 31656 bp 65.56 41.38 85.79
sw_5_scaffold_1800
Class: Halobacteria (85.71%)
28 20468 bp 66.12 51.59 83.27
sw_5_scaffold_201
Order: Halobacteriales (61.54%)
26 25307 bp 66.60 38.76 90.25
sw_5_scaffold_1486
Class: Halobacteria (88%)
25 21984 bp 67.48 50.55 86.38
sw_5_scaffold_446
Order: Halobacteriales (54.17%)
24 16125 bp 68.79 50.31 87.70
sw_5_scaffold_705
Order: Halobacteriales (60.87%)
23 17880 bp 69.06 51.15 88.61
sw_5_scaffold_710
Order: Haloferacales (56.52%)
23 24327 bp 66.85 46.63 92.61
sw_5_scaffold_598
Class: Halobacteria (73.91%)
23 19544 bp 65.67 47.27 83.64
sw_5_scaffold_1123
Order: Halobacteriales (52.38%)
21 20713 bp 66.96 51.64 86.27
sw_5_scaffold_392
Order: Halobacteriales (71.43%)
21 18348 bp 69.42 48.22 94.33
sw_5_scaffold_524
Order: Halobacteriales (61.9%)
21 21447 bp 69.38 46.60 93.17
sw_5_scaffold_947
Class: Halobacteria (76.19%)
21 18386 bp 65.62 44.85 88.81
sw_5_scaffold_1515
Order: Halobacteriales (57.14%)
21 20488 bp 68.12 52.06 86.51
sw_5_scaffold_766
Class: Halobacteria (55%)
20 17533 bp 67.08 43.98 88.31
sw_5_scaffold_290
Class: Halobacteria (85%)
20 16509 bp 66.49 48.81 84.89
sw_5_scaffold_1684
Class: Halobacteria (85%)
20 17413 bp 67.96 48.83 84.99
sw_5_scaffold_2624
Order: Halobacteriales (57.89%)
19 15602 bp 68.34 53.20 83.24
sw_5_scaffold_1406
Order: Halobacteriales (52.63%)
19 14846 bp 65.98 47.14 79.52
sw_5_scaffold_1139
Order: Halobacteriales (57.89%)
19 16108 bp 67.36 49.23 83.80
sw_5_scaffold_1167
Class: Halobacteria (100%)
19 20452 bp 66.91 51.50 80.96
sw_5_scaffold_765
Order: Halobacteriales (68.42%)
19 16067 bp 69.31 57.10 85.03
sw_5_scaffold_1126
Order: Halobacteriales (55.56%)
18 12255 bp 66.85 51.66 81.86
sw_5_scaffold_1320
Order: Halobacteriales (66.67%)
18 20020 bp 64.91 45.46 85.88
sw_5_scaffold_990
Order: Halobacteriales (55.56%)
18 18970 bp 66.04 44.39 90.96
sw_5_scaffold_1677
Order: Halobacteriales (50%)
18 16765 bp 67.41 51.92 83.50
sw_5_scaffold_687
Class: Halobacteria (82.35%)
17 12189 bp 66.41 47.45 76.98
sw_5_scaffold_3296
Order: Halobacteriales (56.25%)
16 12956 bp 67.74 55.08 84.96
sw_5_scaffold_499
Order: Halobacteriales (56.25%)
16 14993 bp 65.98 45.96 85.96
sw_5_scaffold_1388
Class: Halobacteria (87.5%)
16 13158 bp 67.77 49.48 83.80
sw_5_scaffold_440
Order: Halobacteriales (62.5%)
16 12185 bp 66.20 43.34 83.88
sw_5_scaffold_2711
Order: Halobacteriales (87.5%)
16 11424 bp 68.30 52.15 90.02
Displaying items 1-50 of 151 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.