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sw_5_scaffold_646

Search features with annotation key words

Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_646_1
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..540)
DNA (540bp) protein (180aa)
Pantothenate permease n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K793_9EURY
Pantothenate permease {ECO:0000313|EMBL:EMA17061.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 13
panF; pantothenate permease
sw_5_scaffold_646_2
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(537..803)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CFN1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22065.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
Protein of unknown function (DUF3311)
sw_5_scaffold_646_3
unknown

Not on your lists

comp(1239..1559)
DNA (321bp) protein (107aa)

This feature has no annotations

sw_5_scaffold_646_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2209..2652)
DNA (444bp) protein (148aa)
rimI1; Pab N-terminal acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] id=24644516 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Acetyltransferase {ECO:0000313|EMBL:ERH08739.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_5_scaffold_646_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2649..3284)
DNA (636bp) protein (212aa)
DUF92 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INE1_NATPD
hypothetical protein
DUF92 family protein {ECO:0000313|EMBL:CAI50362.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strai
sw_5_scaffold_646_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3284..3829)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXJ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50457.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_5_scaffold_646_7
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3883..4389)
DNA (507bp) protein (169aa)
Uncharacterized protein {ECO:0000313|EMBL:ERH00515.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
Uncharacterized protein id=24622110 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
sw_5_scaffold_646_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4854..5483
DNA (630bp) protein (210aa)
YyaL family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR92_NATPD
hypothetical protein
YyaL family protein {ECO:0000313|EMBL:CAI49351.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_5_scaffold_646_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5787..6593
DNA (807bp) protein (269aa)
TrmB family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR93_NATPD
hypothetical protein
TrmB family transcription regulator {ECO:0000313|EMBL:CAI49350.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas p
sw_5_scaffold_646_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6590..7513)
DNA (924bp) protein (308aa)
mptA; GTP cyclohydrolase I, archaeal-type (EC:3.5.4.-)
GTP cyclohydrolase MptA {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.39 {ECO:0000256|HAMAP-Rule:MF_01527};; GTP cyclohydrolase IV {ECO:0000256|HAMAP-Rule:MF_01527}; TaxID=268739 species="Archaea; Eurya
GTP cyclohydrolase MptA n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0Q0_NATM8
sw_5_scaffold_646_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7583..8395)
DNA (813bp) protein (271aa)
ppnK_1; NAD(+) kinase 1 (inorganic polyphosphate/ATP-NAD kinase) (EC:2.7.1.23)
NAD kinase {ECO:0000255|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000255|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000255|HAMAP-Rule:MF_00361}; TaxID=348780 species="Archaea; Euryarchaeota;
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PPNK_NATPD
sw_5_scaffold_646_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8475..9563
DNA (1089bp) protein (363aa)
circadian clock protein KaiC (EC:2.7.11.1)
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:ACV47775.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ACV47775.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
circadian clock protein, KaiC n=1 Tax=Halomicrobium katesii RepID=UPI00035CC4B9
sw_5_scaffold_646_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9672..9995)
DNA (324bp) protein (108aa)
T-RNA-binding domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZ96_9EURY
T-RNA-binding domain protein {ECO:0000313|EMBL:EFW90017.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihal
EMAP domain-containing protein
sw_5_scaffold_646_14
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10018..10494)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1NPS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH05755.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
hypothetical protein
sw_5_scaffold_646_15
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(10949..11647)
DNA (699bp) protein (233aa)
DNA repair and recombination protein RadB n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XAI3_9EURY
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350, ECO:0000313|EMBL:ELY57613.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natr
radB; DNA repair and recombination protein RadB
sw_5_scaffold_646_16
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11725..12474
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HFT6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ82592.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
sw_5_scaffold_646_17
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12479..13804)
DNA (1326bp) protein (442aa)
UPF0272 protein HAH_2101 n=2 Tax=Haloarcula hispanica RepID=G0HW01_HALHT
hypothetical protein
UPF0272 protein HAH_2101 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (s
sw_5_scaffold_646_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14141..15010)
DNA (870bp) protein (290aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=348780 species="Archaea; Euryarchaeo
DNA topoisomerase 1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT32_NATPD
sw_5_scaffold_646_19
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15022..18099)
DNA (3078bp) protein (1026aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=662476 species="Archaea; Euryarchaeo
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K3K0_9EURY
sw_5_scaffold_646_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18342..20468
DNA (2127bp) protein (709aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:R
Catalase-peroxidase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZW4_HALMD
catalase/peroxidase HPI
sw_5_scaffold_646_21
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20565..20960)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CEX7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21810.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_5_scaffold_646_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20960..21400)
DNA (441bp) protein (147aa)
DUF2240 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISD2_NATPD
hypothetical protein
DUF2240 family protein {ECO:0000313|EMBL:CAI48955.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
sw_5_scaffold_646_23
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21444..21974)
DNA (531bp) protein (177aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AGY3_NATGS
HIT family hydrolase, diadenosine tetraphosphate hydrolase
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:AFZ72350.1}; Histidine triad (HIT) protein {ECO:0000313|EMBL:ELY64265.1}; TaxID=797304 species="Archaea; Euryarchaeota; Hal
sw_5_scaffold_646_24
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22009..22710)
DNA (702bp) protein (234aa)
DnaJ N-terminal domain-containing protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HJE2_9EURY
DnaJ N-terminal domain-containing protein {ECO:0000313|EMBL:ESP88039.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source=
ferredoxin
sw_5_scaffold_646_25
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22963..23166
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003798385
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47625.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_5_scaffold_646_26
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23242..23883)
DNA (642bp) protein (214aa)
map; methionyl aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01975, ECO:0000256|RuleBase:RU003653}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01975};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01975};; EC=3.4.11.18 {
Methionine aminopeptidase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ76_NATM8
sw_5_scaffold_646_27
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23877..24026)
DNA (150bp) protein (50aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01975, ECO:0000256|RuleBase:RU003653}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01975};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01975};; EC=3.4.11.18 {
sw_5_scaffold_646_28
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24119..25081
DNA (963bp) protein (321aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W9I4_9EURY
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KDE60295.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
2-hydroxyacid dehydrogenase
sw_5_scaffold_646_29
unknown

Not on your lists

25348..25620
DNA (273bp) protein (91aa)

This feature has no annotations

sw_5_scaffold_646_30
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25657..28680
DNA (3024bp) protein (1008aa)
FAD-linked oxidase domain protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HQI4_9EURY
FAD-linked oxidase domain protein {ECO:0000313|EMBL:ELZ85364.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii AT
FAD-linked oxidase domain protein
Displaying items 1-30 of 47 in total

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