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sw_5_scaffold_947

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_947_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..1151)
DNA (1149bp) protein (383aa)
FAD-dependent oxidoreductase (Homolog to geranylgeranyl reductase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XR22_NATM8
FAD-dependent oxidoreductase (homolog to geranylgeranyl reductase)
FAD-dependent oxidoreductase (Homolog to geranylgeranyl reductase) {ECO:0000313|EMBL:CCQ36596.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
sw_5_scaffold_947_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1315..2334
DNA (1020bp) protein (340aa)
hemH; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=34
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMR8_NATPD
sw_5_scaffold_947_3
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2336..3706)
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000360BBA2
Modification methylase PaeR7I {ECO:0000313|EMBL:CQR50079.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
adenine-specific DNA methyltransferase
sw_5_scaffold_947_4
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3753..4505)
DNA (753bp) protein (251aa)
Type II site-specific deoxyribonuclease (EC:3.1.21.4)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00035F6601
Type-2 restriction enzyme PaeR7I {ECO:0000313|EMBL:CQR50078.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
sw_5_scaffold_947_5
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4520..5794
DNA (1275bp) protein (425aa)
Integrase family protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DZW2_9EURY
Integrase family protein {ECO:0000313|EMBL:ELZ39634.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM
integrase family protein
sw_5_scaffold_947_6
unknown

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comp(5836..6132)
DNA (297bp) protein (99aa)

This feature has no annotations

sw_5_scaffold_947_7
unknown

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comp(6165..6575)
DNA (411bp) protein (137aa)

This feature has no annotations

sw_5_scaffold_947_trna_1
unknown

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comp(7319..7393)
DNA (75bp)
transferRNA
sw_5_scaffold_947_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7429..7812)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J139_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01435.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_5_scaffold_947_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7833..8444)
DNA (612bp) protein (204aa)
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:CAI49595.1}; EC=2.5.1.17 {ECO:0000313|EMBL:CAI49595.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQK0_NATPD
hypothetical protein
sw_5_scaffold_947_10
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8585..8761
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6Y8_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH35417.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_5_scaffold_947_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8764..10224)
DNA (1461bp) protein (487aa)
gcvP2; glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Glycine cleavage system protein P beta subunit {ECO:0000313|EMBL:CAI50388.1}; EC=1.4.4.2 {ECO:0000313|EMBL:CAI50388.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Glycine dehydrogenase (Decarboxylating) (Glycine cleavage system protein P) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INB5_NATPD
sw_5_scaffold_947_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10221..11570)
DNA (1350bp) protein (450aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
Glycine dehydrogenase (Decarboxylating) {ECO:0000313|EMBL:ACV48008.1}; EC=1.4.4.2 {ECO:0000313|EMBL:ACV48008.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
glycine dehydrogenase subunit 1 n=1 Tax=Halomicrobium katesii RepID=UPI0003623C75
sw_5_scaffold_947_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11753..13078)
DNA (1326bp) protein (442aa)
Probable aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000313|EMBL:ELZ35316.1};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rul
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
Probable aminomethyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DII3_9EURY
sw_5_scaffold_947_14
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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13237..13668
DNA (432bp) protein (144aa)
Uncharacterized conserved protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NP13_HALBP
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ADQ66444.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY31164.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
sw_5_scaffold_947_15
unknown

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comp(13678..13824)
DNA (147bp) protein (49aa)

This feature has no annotations

sw_5_scaffold_947_16
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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14090..15091
DNA (1002bp) protein (334aa)
Sodium/calcium exchanger membrane region n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CS22_9EURY
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:ELZ25207.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
sodium/calcium exchanger membrane region
sw_5_scaffold_947_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15129..15965
DNA (837bp) protein (279aa)
TatD-related deoxyribonuclease n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4H0_HALMD
TatD-related deoxyribonuclease
TatD-related deoxyribonuclease {ECO:0000313|EMBL:ACV47992.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muko
sw_5_scaffold_947_18
unknown

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16023..16337
DNA (315bp) protein (105aa)

This feature has no annotations

sw_5_scaffold_947_19
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16368..17627
DNA (1260bp) protein (420aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JA85_HALJB
molybdenum cofactor synthesis domain-containing protein
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ADJ14607.1}; Molybdenum cofactor synthesis protein {ECO:0000313|EMBL:ELY39980.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacte
sw_5_scaffold_947_20
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17712..18386
DNA (675bp) protein (225aa)
Molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K3A3_9EURY
Molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein {ECO:0000313|EMBL:EMA18715.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
moeA2; molybdopterin biosynthesis protein moeA
Displaying 21 items

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