ggKbase home page

sw_5_scaffold_1677

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1677_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..523)
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Halococcus hamelinensis RepID=M0M6Y6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40135.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_5_scaffold_1677_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(520..852)
DNA (333bp) protein (111aa)
Cupin 2 barrel domain-containing protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAI2_HALJB
Cupin 2 barrel domain-containing protein
Cupin 2 barrel domain-containing protein {ECO:0000313|EMBL:ELY39500.1}; Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADJ14704.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteri
sw_5_scaffold_1677_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(959..1414)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITP0_NATPD
aromatic amino acid cluster protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48493.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_1677_4
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1441..2250)
DNA (810bp) protein (270aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1592728 species="Archaea; Eurya
Shikimate dehydrogenase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P122_HALMD
shikimate dehydrogenase
sw_5_scaffold_1677_5

Not on your lists

2382..3722
DNA (1341bp) protein (447aa)
Sodium/calcium exchanger membrane region n=1 Tax=halophilic archaeon DL31 RepID=G2MJL3_9ARCH
sodium/calcium exchanger membrane region
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:AEN05066.1}; Flags: Precursor;; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_1677_6
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3785..4723
DNA (939bp) protein (313aa)
Rhomboid family protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z3Q3_9EURY
Rhomboid family protein {ECO:0000313|EMBL:ELY80337.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
rhomboid family protein
sw_5_scaffold_1677_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4723..5472
DNA (750bp) protein (250aa)
Endonuclease V {ECO:0000255|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000255|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000255|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000255|HAMAP-
Endonuclease V n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=NFI_NATPD
nfi; endonuclease V
sw_5_scaffold_1677_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5953..6774
DNA (822bp) protein (274aa)
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CCQ35859.1}; EC=1.1.1.- {ECO:0000313|EMBL:CCQ35859.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y090_NATM8
sw_5_scaffold_1677_9
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7373..8608
DNA (1236bp) protein (412aa)
Transposase, IS605 OrfB family n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LW91_HALLT
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:ACM58481.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi
sw_5_scaffold_1677_10
unknown

Not on your lists

8716..8898
DNA (183bp) protein (61aa)

This feature has no annotations

sw_5_scaffold_1677_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8895..9908)
DNA (1014bp) protein (338aa)
arsenical pump-driving ATPase (EC:3.6.3.16)
Arsenite-activated ATPase ArsA n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWN4_9EURY
Arsenite-activated ATPase ArsA {ECO:0000313|EMBL:ELZ27605.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
sw_5_scaffold_1677_12
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9954..10259)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CA23_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20075.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
sw_5_scaffold_1677_13
unknown

Not on your lists

comp(10240..10479)
DNA (240bp) protein (80aa)

This feature has no annotations

sw_5_scaffold_1677_14
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11031..12404
DNA (1374bp) protein (458aa)
FO synthase subunit 2 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LIB8_9EURY
FO synthase subunit 2 {ECO:0000313|EMBL:EMA32169.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
radical SAM protein
sw_5_scaffold_1677_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12822..13910)
DNA (1089bp) protein (363aa)
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}
FO synthase subunit 1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4F5_9EURY
cofG; FO synthase subunit 1
sw_5_scaffold_1677_16
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14093..14704)
DNA (612bp) protein (204aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=122745
2-phospho-L-lactate guanylyltransferase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H7T9_9EURY
phospholactate guanylyltransferase
sw_5_scaffold_1677_17
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14705..15499)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H5I5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ79811.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
hypothetical protein
sw_5_scaffold_1677_18
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15453..16628)
DNA (1176bp) protein (392aa)
Tubulin/FtsZ GTPase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NN76_HALUD
Tubulin/FtsZ GTPase
Tubulin/FtsZ GTPase {ECO:0000313|EMBL:ACV11476.1}; Flags: Precursor;; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus
Displaying 18 items

View Taxonomy