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sw_5_scaffold_499

Search features with annotation key words

Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_499_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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368..652
DNA (285bp) protein (95aa)
acyP; acylphosphatase (EC:3.6.1.7)
Acylphosphatase {ECO:0000313|EMBL:CCQ37010.1}; EC=3.6.1.7 {ECO:0000313|EMBL:CCQ37010.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;"
Acylphosphatase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRV0_NATM8
sw_5_scaffold_499_2
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(649..1425)
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IDA3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG03920.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_5_scaffold_499_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1730..3157
DNA (1428bp) protein (476aa)
YjeF-like protein, hydroxyethylthiazole kinase-related n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NNB4_HALBP
yjef-like protein, hydroxyethylthiazole kinase-related
YjeF-like protein, hydroxyethylthiazole kinase-related {ECO:0000313|EMBL:ADQ67452.1}; Yjef-like protein {ECO:0000313|EMBL:ELY23273.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Halof
sw_5_scaffold_499_4
unknown

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3219..3551
DNA (333bp) protein (111aa)

This feature has no annotations

sw_5_scaffold_499_5
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4231..5202
DNA (972bp) protein (324aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostag
DNA methylase N-4/N-6 domain protein n=1 Tax=halophilic archaeon DL31 RepID=G2MJ84_9ARCH
DNA methylase
sw_5_scaffold_499_6

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comp(5240..5944)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MJ83_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN04632.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_499_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6105..6428)
DNA (324bp) protein (108aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
DNA-directed RNA polymerase subunit n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2E5U6_9EURY
transcription termination factor Tfs
sw_5_scaffold_499_8
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6470..6856)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Haloferax sp. BAB2207 RepID=L5NHY1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELK50030.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. BAB2207.;"
hypothetical protein
sw_5_scaffold_499_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6853..7569)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMU8_NATPD
rad50 ATPase
CopG domain protein {ECO:0000313|EMBL:CAI50558.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_5_scaffold_499_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7626..8462)
DNA (837bp) protein (279aa)
Homolog to KaiC-like transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XT39_NATM8
homolog to KaiC-like transcription regulator
Uncharacterized protein {ECO:0000313|EMBL:CCQ37567.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_499_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8512..9474)
DNA (963bp) protein (321aa)
Beta-rfap synthase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DBE2_9EURY
Beta-rfap synthase {ECO:0000313|EMBL:ELZ32781.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14
beta-ribofuranosylaminobenzene 5'-phosphate synthase family protein
sw_5_scaffold_499_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9598..11088
DNA (1491bp) protein (497aa)
deoxyribodipyrimidine photo-lyase (EC:4.1.99.3)
Deoxyribodipyrimidine photolyase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CG81_9EURY
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:ELZ22261.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsb
sw_5_scaffold_499_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11093..11584)
DNA (492bp) protein (164aa)
HTH domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR4_NATPD
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CAI48821.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_5_scaffold_499_14
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11622..12458)
DNA (837bp) protein (279aa)
Alpha/beta hydrolase fold protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y2A5_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ELY67821.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM
alpha/beta hydrolase fold protein
sw_5_scaffold_499_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12458..13597)
DNA (1140bp) protein (380aa)
Acyl-CoA dehydrogenase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4M6_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA52049.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
acyl-CoA dehydrogenase
sw_5_scaffold_499_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13792..14991)
DNA (1200bp) protein (400aa)
dehydrogenase/reductase 6 (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CAI50174.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAI50174.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INX8_NATPD
Displaying 16 items

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