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sw_5_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_68_1
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(61..696)
DNA (636bp) protein (212aa)
Proteasome endopeptidase complex (EC:3.4.25.1)
Proteasome subunit beta {ECO:0000255|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000255|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000255|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome subunit beta n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=PSB_HALUD
sw_5_scaffold_68_2
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1063..1242
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IBF7_9EURY
hypothetical protein
RNA-binding protein {ECO:0000313|EMBL:AHG04210.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_5_scaffold_68_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1244..1510
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DJJ7_9EURY
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=122748
elongation factor 1-beta
sw_5_scaffold_68_4
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1565..1936
DNA (372bp) protein (124aa)
50S ribosomal protein L21e n=4 Tax=Haloarcula RepID=G0HWS9_HALHT
rpl21E; 50S ribosomal protein L21e
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
sw_5_scaffold_68_5
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1936..2292
DNA (357bp) protein (119aa)
RNA polymerase Rpb4 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D4D8_HALXS
RNA polymerase Rpb4
RNA polymerase Rpb4 {ECO:0000313|EMBL:AEH38678.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323
sw_5_scaffold_68_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2335..2919
DNA (585bp) protein (195aa)
RNA-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTY1_9EURY
RNA-binding protein {ECO:0000313|EMBL:EMA49056.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
RNA-binding protein
sw_5_scaffold_68_7

Not on your lists


2971..3810
DNA (840bp) protein (280aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=halophilic archaeon DL31 RepID=G2ML66_9ARCH
ribosomal RNA small subunit methyltransferase A
sw_5_scaffold_68_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3807..4961
DNA (1155bp) protein (385aa)
Mechanosensitive channel protein MscS n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPM1_NATPD
msc_5; mechanosensitive channel
Mechanosensitive channel protein MscS {ECO:0000313|EMBL:CAI49929.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_5_scaffold_68_9
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4939..5550
DNA (612bp) protein (204aa)
Protein-N(5)-glutamine methyltransferase prmC, methylates polypeptide chain release factors RF1 and RF2 n=2 Tax=Halarchaeum acidiphilum RepID=U3A9Q0_9EURY
Protein-N(5)-glutamine methyltransferase prmC, methylates polypeptide chain release factors RF1 and RF2 {ECO:0000313|EMBL:GAD51488.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halo
methylase
sw_5_scaffold_68_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5595..6590
DNA (996bp) protein (332aa)
Cobalamin-independent synthase MetE domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZK6_HALMD
Cobalamin-independent synthase MetE domain-containing protein
Cobalamin-independent synthase MetE domain protein {ECO:0000313|EMBL:ACV48774.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
sw_5_scaffold_68_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6587..7654
DNA (1068bp) protein (356aa)
Methionine synthase {ECO:0000256|HAMAP-Rule:MF_00288}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00288};; Homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00288}; TaxID=1210908 species="Archaea;
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (EC:2.1.1.14)
Probable methylcobalamin:homocysteine methyltransferase n=1 Tax=Halogranum salarium B-1 RepID=J3EW63_9EURY
sw_5_scaffold_68_12

Not on your lists

7867..8265
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MKN9_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN04987.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_68_13
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8262..9260)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JN18_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09060.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_5_scaffold_68_14
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9257..9673)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJ90_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09061.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_5_scaffold_68_15
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9670..10317)
DNA (648bp) protein (216aa)
Formate dehydrogenase, iron-sulfur subunit {ECO:0000313|EMBL:AEM57519.1}; EC=1.2.1.2 {ECO:0000313|EMBL:AEM57519.1};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
Formate dehydrogenase-O iron-sulfur subunit n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K8D0_9EURY
formate dehydrogenase
sw_5_scaffold_68_16
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10350..13712)
DNA (3363bp) protein (1121aa)
Formate dehydrogenase subunit alpha n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LLQ0_HALJP
Formate dehydrogenase subunit alpha {ECO:0000313|EMBL:EMA32955.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japo
formate dehydrogenase
sw_5_scaffold_68_17
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14152..14847)
DNA (696bp) protein (232aa)
Putative molybdenum-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IZF7_HALVA
Putative molybdenum-binding protein {ECO:0000313|EMBL:EMA00840.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula valli
ModE family transcriptional regulator
sw_5_scaffold_68_18
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15031..17157
DNA (2127bp) protein (709aa)
Ferridoxin n=1 Tax=Haloarcula hispanica N601 RepID=V5TLS0_HALHI
Ferridoxin {ECO:0000313|EMBL:AJF24588.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
ferridoxin
sw_5_scaffold_68_19
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17154..17780
DNA (627bp) protein (209aa)
Cytoplasmic chaperone TorD n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JN21_HALVA
Cytoplasmic chaperone TorD {ECO:0000313|EMBL:EMA09065.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis A
molecular chaperone TorD
sw_5_scaffold_68_20
unknown

Not on your lists

comp(17777..18007)
DNA (231bp) protein (77aa)

This feature has no annotations

sw_5_scaffold_68_21
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18000..18296)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V2J3_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46259.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_5_scaffold_68_22
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18526..19749
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K4H1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA16096.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_5_scaffold_68_23

Not on your lists

comp(19751..19894)
DNA (144bp) protein (48aa)
Uncharacterized protein {ECO:0000313|EMBL:AEN04994.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_68_24
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19949..20296)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KFS8_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA18695.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
sw_5_scaffold_68_25
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20293..20439)
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=M0K7H9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA32965.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_5_scaffold_68_26
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20436..20702)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JM80_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09074.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_5_scaffold_68_27
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20770..20946)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LLP6_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA32950.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_5_scaffold_68_28

Not on your lists

comp(20990..21781)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MIR6_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN04998.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_68_29
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21778..23484)
DNA (1707bp) protein (569aa)
Aldehyde ferredoxin oxidoreductase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LIR5_HALJP
Aldehyde ferredoxin oxidoreductase {ECO:0000313|EMBL:EMA32968.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japon
aldehyde:ferredoxin oxidoreductase
sw_5_scaffold_68_30
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23801..24415
DNA (615bp) protein (205aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; G
Molybdenum cofactor guanylyltransferase n=2 Tax=Haloarcula hispanica RepID=V5TNX3_HALHI
mobA; molybdopterin-guanine dinucleotide biosynthesis protein A
Displaying items 1-30 of 49 in total

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