ggKbase home page

sw_5_scaffold_1126

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1126_1
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..334
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K437_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA15961.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
sw_5_scaffold_1126_2
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

431..604
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K437_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA15961.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
sw_5_scaffold_1126_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1317..1706)
DNA (390bp) protein (130aa)
Ferredoxin 2Fe-2S n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX60_9EURY
ferredoxin
Ferredoxin 2Fe-2S {ECO:0000313|EMBL:EMA49419.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
sw_5_scaffold_1126_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1810..2949)
DNA (1140bp) protein (380aa)
Phosphate permease n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPY8_HALMO
Phosphate permease {ECO:0000313|EMBL:EMA47711.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
anion permease
sw_5_scaffold_1126_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3033..3761
DNA (729bp) protein (243aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1R6_9EURY
sw_5_scaffold_1126_6
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4061..4648
DNA (588bp) protein (196aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076};; TaxID=519442 species="Archaea;
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NU46_HALUD
sw_5_scaffold_1126_7
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4645..5181)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W6Z8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY45249.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
hypothetical protein
sw_5_scaffold_1126_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5305..5562)
DNA (258bp) protein (86aa)
Glutaredoxin n=1 Tax=Halogranum salarium B-1 RepID=J3A2M6_9EURY
Glutaredoxin {ECO:0000313|EMBL:EJN59573.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
glutaredoxin
sw_5_scaffold_1126_9
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5652..6011)
DNA (360bp) protein (120aa)
Major facilitator superfamily protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P0I9_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:EMA63561.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocuri
major facilitator superfamily protein
sw_5_scaffold_1126_10
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6066..6293)
DNA (228bp) protein (76aa)
Major facilitator superfamily protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WD39_9EURY
MFS transporter {ECO:0000313|EMBL:KDE58333.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
major facilitator superfamily protein
sw_5_scaffold_1126_11
unknown

Not on your lists

comp(6321..6554)
DNA (234bp) protein (78aa)

This feature has no annotations

sw_5_scaffold_1126_12
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6610..7662
DNA (1053bp) protein (351aa)
hydroxymethylbilane synthase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B6R7_9EURY
Porphobilinogen deaminase {ECO:0000313|EMBL:ELZ06495.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
sw_5_scaffold_1126_13
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7655..8416
DNA (762bp) protein (254aa)
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107)
Uroporphyrin-III C-methyltransferase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P8L1_9EURY
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EMA66482.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidinge
sw_5_scaffold_1126_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8432..9172
DNA (741bp) protein (247aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EMA36199.1}; EC=4.2.1.75 {ECO:0000313|EMBL:EMA36199.1};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
hemD; uroporphyrinogen-III synthase (EC:4.2.1.75)
Uroporphyrinogen-III synthase n=2 Tax=Halococcus hamelinensis RepID=M0LUZ4_9EURY
sw_5_scaffold_1126_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9214..10167)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMG1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23572.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_1126_16
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10252..10968)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNY3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ05353.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_5_scaffold_1126_17
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11426..11662
DNA (237bp) protein (79aa)
Putative repressor of tryptophan metabolism TrpY n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IC03_9EURY
trpY; putative repressor of tryptophan metabolism TrpY
Putative repressor of tryptophan metabolism TrpY {ECO:0000313|EMBL:ELZ94335.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofera
sw_5_scaffold_1126_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11659..12255
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D008_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28800.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
Displaying 18 items

View Taxonomy