ggKbase home page

sw_5_scaffold_667

Search features with annotation key words

Displaying items 1-30 of 41 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_667_1
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..449)
DNA (447bp) protein (149aa)
ABC transporter-related protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BB01_9EURY
ABC transporter-related protein {ECO:0000313|EMBL:ELZ08076.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermoto
ABC-type multidrug transport system, ATPase component
sw_5_scaffold_667_2
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

586..1530
DNA (945bp) protein (315aa)
DNA adenine methylase (EC:2.1.1.72)
DNA adenine methylase n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NH90_9EURY
DNA adenine methylase {ECO:0000313|EMBL:ELZ30157.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.;"
sw_5_scaffold_667_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1713..4337
DNA (2625bp) protein (875aa)
Zinc-transporting ATPase n=1 Tax=Halogranum salarium B-1 RepID=J3JCX4_9EURY
Zinc-transporting ATPase {ECO:0000313|EMBL:EJN56989.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
zntA1; zinc-transporting ATPase
sw_5_scaffold_667_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4374..5273)
DNA (900bp) protein (300aa)
Bile acid:sodium symporter n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NY93_HALMD
sodium symporter
Bile acid:sodium symporter {ECO:0000313|EMBL:ACV48553.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohata
sw_5_scaffold_667_5
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5522..7669
DNA (2148bp) protein (716aa)
Glycosyl hydrolase family 32 n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PAA0_9EURY
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:EMA67057.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 149
glycosyl hydrolase family 32
sw_5_scaffold_667_6
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7670..9019)
DNA (1350bp) protein (450aa)
glycoside hydrolase family 68 (EC:2.4.1.10)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003629FA5
Glycoside hydrolase family 68 {ECO:0000313|EMBL:EMA66706.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM
sw_5_scaffold_667_7
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9121..11022)
DNA (1902bp) protein (634aa)
Transposase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JYQ0_9EURY
tnp; transposase
Transposase {ECO:0000313|EMBL:EMA13603.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 33800.;"
sw_5_scaffold_667_8
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11019..11174)
DNA (156bp) protein (52aa)
Uncharacterized protein n=5 Tax=Halobacteriaceae RepID=C7NYP3_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ88846.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
sw_5_scaffold_667_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11228..11689
DNA (462bp) protein (154aa)
Transposase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQY2_HALVA
Transposase {ECO:0000313|EMBL:EMA11396.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;"
transposase
sw_5_scaffold_667_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11780..12043)
DNA (264bp) protein (88aa)
Peptidase U61 LD-carboxypeptidase A n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N262_9EURY
Peptidase U61 LD-carboxypeptidase A {ECO:0000313|EMBL:EMA50800.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
putative MccF-like protein (microcin C7 resistance)
sw_5_scaffold_667_11
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12236..12409)
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA04605.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
sw_5_scaffold_667_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12523..12765)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037F4260
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47559.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_5_scaffold_667_13
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12795..13190)
DNA (396bp) protein (132aa)
Glutaredoxin-related protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YUK6_9EURY
Glutaredoxin-related protein {ECO:0000313|EMBL:GAD52432.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;
glutaredoxin-like protein
sw_5_scaffold_667_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13464..14156)
DNA (693bp) protein (231aa)
HhH-GPD family protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVZ7_HALMD
HhH-GPD family protein
HhH-GPD family protein {ECO:0000313|EMBL:ACV48126.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (
sw_5_scaffold_667_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14296..14904
DNA (609bp) protein (203aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Halogranum salarium B-1 RepID=J3JFD5_9EURY
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EJN59131.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum sala
glyoxalase/bleomycin resistance protein/dioxygenase
sw_5_scaffold_667_16
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15157..15735)
DNA (579bp) protein (193aa)
HoxA-like transcriptional regulator n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YS06_9EURY
HoxA-like transcriptional regulator {ECO:0000313|EMBL:GAD51522.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1
response regulator receiver protein
sw_5_scaffold_667_17
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15732..16757)
DNA (1026bp) protein (342aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A9T3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD51523.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
sw_5_scaffold_667_18
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16813..17274)
DNA (462bp) protein (154aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRN7_HALUD
deoxyuridine 5'-triphosphate nucleotidohydrolase
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000313|EMBL:ACV11973.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Ha
sw_5_scaffold_667_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17360..17890
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU35_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48348.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_667_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17928..18344
DNA (417bp) protein (139aa)
Thioesterase domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU33_NATPD
hypothetical protein
Thioesterase domain protein {ECO:0000313|EMBL:CAI48350.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
sw_5_scaffold_667_21
unknown

Not on your lists

18623..19021
DNA (399bp) protein (133aa)

This feature has no annotations

sw_5_scaffold_667_22
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19022..19366)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Haloferax RepID=M0G1C7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR49083.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_5_scaffold_667_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19521..19913
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG08_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43360.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_667_24

Not on your lists

19910..20563
DNA (654bp) protein (218aa)
Membrane complex biogenesis protein, BtpA family n=1 Tax=uncultured archaeon A07HB70 RepID=V4XGX3_9ARCH
Membrane complex biogenesis protein, BtpA family {ECO:0000313|EMBL:ESS07409.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
membrane complex biogenesis protein, BtpA family
sw_5_scaffold_667_25

Not on your lists

comp(20551..21489)
DNA (939bp) protein (313aa)
PfkB domain protein n=1 Tax=halophilic archaeon DL31 RepID=G2MH56_9ARCH
PfkB domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:AEN06302.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_667_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21482..22252)
DNA (771bp) protein (257aa)
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-)
Oxidoreductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAC3_9EURY
Oxidoreductase {ECO:0000313|EMBL:ELZ20246.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
sw_5_scaffold_667_27
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22534..23457)
DNA (924bp) protein (308aa)
Peroxiredoxin n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3Z7_HALJB
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:ADJ15389.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (strain
sw_5_scaffold_667_28
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23786..25435)
DNA (1650bp) protein (550aa)
Thiamine pyrophosphate domain-containing TPP-binding protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M5Q5_9EURY
Thiamine pyrophosphate domain-containing TPP-binding protein {ECO:0000313|EMBL:EMA41011.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" sou
thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase
sw_5_scaffold_667_29
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25655..26857)
DNA (1203bp) protein (401aa)
Alcohol dehydrogenase, class IV n=1 Tax=Natronococcus occultus SP4 RepID=L0K3I9_9EURY
alcohol dehydrogenase, class IV
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:AGB38909.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus
sw_5_scaffold_667_30
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26891..28324)
DNA (1434bp) protein (478aa)
acetaldehyde dehydrogenase (EC:1.2.1.10)
Acetaldehyde dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LVV1_9EURY
Acetaldehyde dehydrogenase {ECO:0000313|EMBL:EMA37576.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis
Displaying items 1-30 of 41 in total

View Taxonomy