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sw_5_scaffold_583

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_583_1
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2..3406)
DNA (3405bp) protein (1135aa)
DNA topoisomerase VI, subunit B n=1 Tax=Natronococcus occultus SP4 RepID=L0K1G7_9EURY
DNA topoisomerase VI, subunit B
DNA topoisomerase VI, subunit B {ECO:0000313|EMBL:AGB39157.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus
sw_5_scaffold_583_2

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4372..7545
DNA (3174bp) protein (1058aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|RuleBase:RU003363};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
DNA gyrase subunit B n=1 Tax=halophilic archaeon DL31 RepID=G2MH38_9ARCH
sw_5_scaffold_583_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7542..10028
DNA (2487bp) protein (829aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
DNA gyrase subunit A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPV7_NATPD
gyrA; DNA gyrase subunit A
sw_5_scaffold_583_4
unknown

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comp(10030..10314)
DNA (285bp) protein (95aa)

This feature has no annotations

sw_5_scaffold_583_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10638..11537)
DNA (900bp) protein (300aa)
Arginase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KKJ4_9EURY
arginase
Arginase {ECO:0000313|EMBL:ELZ24535.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
sw_5_scaffold_583_6
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11647..12558)
DNA (912bp) protein (304aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NUH9_HALBP
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ADQ68699.1}; Flags: Precursor;; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" s
sw_5_scaffold_583_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12654..13193
DNA (540bp) protein (180aa)
Transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPK4_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ24538.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
hypothetical protein
sw_5_scaffold_583_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13245..14417
DNA (1173bp) protein (391aa)
ndh; probable NADH dehydrogenase (EC:1.6.99.3)
Probable NADH dehydrogenase {ECO:0000313|EMBL:CCQ36641.1}; EC=1.6.99.3 {ECO:0000313|EMBL:CCQ36641.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Probable NADH dehydrogenase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XR20_NATM8
sw_5_scaffold_583_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14738..15547)
DNA (810bp) protein (270aa)
udp1; uridine phosphorylase (EC:2.4.2.3); K00757 uridine phosphorylase [EC:2.4.2.3] id=24614829 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uridine phosphorylase {ECO:0000313|EMBL:ESP88729.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonu
purine or other phosphorylase family 1
sw_5_scaffold_583_10
unknown

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15622..16014
DNA (393bp) protein (131aa)

This feature has no annotations

sw_5_scaffold_583_11
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(16015..16221)
DNA (207bp) protein (69aa)
cdd; cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H1W8_9EURY
Cytidine deaminase {ECO:0000313|EMBL:ELZ77767.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;"
sw_5_scaffold_583_12
unknown

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17124..17468
DNA (345bp) protein (115aa)

This feature has no annotations

sw_5_scaffold_583_13
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(17430..18752)
DNA (1323bp) protein (441aa)
Ribose/branched-chain amino acids ABC transporter permease n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EG74_9EURY
Ribose/branched-chain amino acids ABC transporter permease {ECO:0000313|EMBL:ELZ46765.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sour
ribose ABC transporter permease
sw_5_scaffold_583_14
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(18749..19939)
DNA (1191bp) protein (397aa)
Putative sugar ABC transporter ATP-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CTU7_9EURY
Putative sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ26063.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source=
nucleoside ABC transporter ATP-binding protein
sw_5_scaffold_583_15
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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19980..20357
DNA (378bp) protein (126aa)
Putative ABC transporter ATP-binding protein YufO n=1 Tax=Streptomyces afghaniensis 772 RepID=S4N248_9ACTO
Putative ABC transporter ATP-binding protein YufO {ECO:0000313|EMBL:EPJ40977.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomy
sw_5_scaffold_583_16
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(20240..21223)
DNA (984bp) protein (328aa)
ABC-type transport system, substrate-binding protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EI58_9EURY
ABC-type transport system, substrate-binding protein {ECO:0000313|EMBL:ELZ46763.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
yufN; ABC transporter
sw_5_scaffold_583_17
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(21471..22832)
DNA (1362bp) protein (454aa)
Phosphomannomutase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CS80_9EURY
Phosphomannomutase {ECO:0000313|EMBL:ELZ26061.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14
phosphomannomutase
sw_5_scaffold_583_18
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(23036..23485)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YVW2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY78274.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
sw_5_scaffold_583_19

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23595..24098
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JXT3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESS07232.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_5_scaffold_583_20
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(24114..26252)
DNA (2139bp) protein (713aa)
Type II secretion system protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS52_9EURY
Type II secretion system protein {ECO:0000313|EMBL:EFW92821.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauc
hypothetical protein
sw_5_scaffold_583_21
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(26499..27851)
DNA (1353bp) protein (451aa)
Type II secretion system protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YFT2_9EURY
type II secretion system protein E
Type II secretion system protein {ECO:0000313|EMBL:GAD52986.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52
sw_5_scaffold_583_22
unknown

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comp(27904..28191)
DNA (288bp) protein (96aa)

This feature has no annotations

sw_5_scaffold_583_23
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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28304..28975
DNA (672bp) protein (224aa)
Methyltransferase type 11 n=1 Tax=Halobacterium sp. DL1 RepID=G4IF23_9EURY
S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:AHG03638.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="
type 11 methyltransferase
sw_5_scaffold_583_trna_1
unknown

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29072..29142
DNA (71bp)
transferRNA
sw_5_scaffold_583_24
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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29197..29538
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P735_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA64650.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
sw_5_scaffold_583_25
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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29535..30347
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7BM88_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFO57602.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
sw_5_scaffold_583_26
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(30607..31074)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DE56_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH39332.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_5_scaffold_583_27
unknown

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comp(31084..31272)
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 28 items

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