ggKbase home page

sw_5_scaffold_1460

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1460_trna_1
unknown

Not on your lists

comp(2..73)
DNA (72bp)
transferRNA
sw_5_scaffold_1460_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(103..771)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDD8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55558.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_5_scaffold_1460_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

832..1542
DNA (711bp) protein (237aa)
fadA2; enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:CCQ36381.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CCQ36381.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
Enoyl-CoA hydratase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y1N1_NATM8
sw_5_scaffold_1460_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1569..2186
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CFH7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21117.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_1460_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2233..2721
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MRD0_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA48287.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_5_scaffold_1460_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2723..3094)
DNA (372bp) protein (124aa)
Putative transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5V0_HALJB
tfx; putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ADJ13756.1}; Transcriptional regulator {ECO:0000313|EMBL:ELY34198.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
sw_5_scaffold_1460_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3072..3596)
DNA (525bp) protein (175aa)
Deoxyribonuclease/rho motif-related TRAM {ECO:0000313|EMBL:CCQ33545.1}; Trans-aconitate 2-methyltransferase protein {ECO:0000313|EMBL:ERJ07505.1}; EC=2.1.1.144 {ECO:0000313|EMBL:ERJ07505.1};; TaxID=10
Deoxyribonuclease/rho motif-related TRAM n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJX6_9EURY
deoxyribonuclease/rho motif-related TRAM
sw_5_scaffold_1460_7
unknown

Not on your lists

4088..4309
DNA (222bp) protein (74aa)

This feature has no annotations

sw_5_scaffold_1460_8
unknown

Not on your lists

comp(4322..4849)
DNA (528bp) protein (176aa)

This feature has no annotations

sw_5_scaffold_1460_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5181..6173)
DNA (993bp) protein (331aa)
radical SAM protein n=1 Tax=Halomicrobium katesii RepID=UPI0003741E37
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ACV47065.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohata
sw_5_scaffold_1460_10
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6331..6765
DNA (435bp) protein (145aa)
Polysaccharide biosynthesis protein GtrA n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SS41_9EURY
GtrA family protein {ECO:0000313|EMBL:ELY71014.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
GtrA family protein
sw_5_scaffold_1460_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6790..7872
DNA (1083bp) protein (361aa)
DUF373 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZH0_NATM8
DUF373 family protein
DUF373 family protein {ECO:0000313|EMBL:CCQ35561.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
sw_5_scaffold_1460_12
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7894..8748)
DNA (855bp) protein (285aa)
Farnesyl-pyrrophosphate synthase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KNG4_HALAR
Farnesyl-pyrrophosphate synthase {ECO:0000313|EMBL:EMA22448.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argenti
fps; farnesyl-pyrrophosphate synthase
sw_5_scaffold_1460_13
unknown

Not on your lists

8835..9140
DNA (306bp) protein (102aa)

This feature has no annotations

sw_5_scaffold_1460_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9475..10200)
DNA (726bp) protein (242aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQC1_NATPD
etfA; electron transfer flavoprotein, alpha subunit
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:CAI49675.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natro
sw_5_scaffold_1460_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10349..11149)
DNA (801bp) protein (267aa)
Electron transfer flavoprotein beta subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK77_NATM8
etfB; electron transfer flavoprotein beta subunit
Electron transfer flavoprotein beta subunit {ECO:0000313|EMBL:CCQ35402.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natron
sw_5_scaffold_1460_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11441..12544)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAU7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42468.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_1460_17
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12651..13955
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UXZ6_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKH96713.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
sw_5_scaffold_1460_18
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13981..14457
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DQL8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKF39363.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
archaeal flagellin-like protein
sw_5_scaffold_1460_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14454..15116)
DNA (663bp) protein (221aa)
S-adenosylmethionine-dependent methyltransferase 1 (EC:2.1.1.-)
Probable demethylmenaquinone methyltransferase {ECO:0000313|EMBL:CAI50608.1}; EC=2.1.1.163 {ECO:0000313|EMBL:CAI50608.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
S-adenosylmethionine-dependent methyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMQ0_NATPD
sw_5_scaffold_1460_20
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15222..17204
DNA (1983bp) protein (661aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A345_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59758.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_5_scaffold_1460_21
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17208..17339)
DNA (132bp) protein (44aa)
adh; alcohol dehydrogenase (EC:1.1.1.1)
Zn-dependent alcohol dehydrogenase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AWB2_NATA1
Zn-dependent alcohol dehydrogenase {ECO:0000313|EMBL:ELZ02825.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strai
sw_5_scaffold_1460_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17281..18195)
DNA (915bp) protein (305aa)
adh; alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase {ECO:0000313|EMBL:CAI48721.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CAI48721.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomo
Oxidoreductase (Homolog to zinc-containing alcohol dehydrogenase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT13_NATPD
sw_5_scaffold_1460_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18695..18982
DNA (288bp) protein (96aa)
Translation initiation factor 1A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4P7_9EURY
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
translation initiation factor eIF-1A
sw_5_scaffold_1460_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18990..19856
DNA (867bp) protein (289aa)
RIO-type serine/threonine protein kinase Rio1 {ECO:0000313|EMBL:CAI48747.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAI48747.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
RIO-type serine/threonine protein kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISY8_NATPD
RIO-like serine/threonine protein kinase II
sw_5_scaffold_1460_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20206..20601
DNA (396bp) protein (132aa)
GNAT family acetyltransferase {ECO:0000313|EMBL:CAI48593.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAI48593.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
GNAT family acetyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITE1_NATPD
protein N-acetyltransferase-like protein
sw_5_scaffold_1460_26
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20666..21127
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I809_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB14928.1}; Flags: Precursor;; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber
sw_5_scaffold_1460_27
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


21203..21838
DNA (636bp) protein (212aa)
KH domain protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AIN4_NATGS
KH domain-containing protein
KH domain protein {ECO:0000313|EMBL:AFZ72930.1}; RNA-processing protein {ECO:0000313|EMBL:ELY69922.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronob
sw_5_scaffold_1460_28
unknown

Not on your lists

comp(21844..21936)
DNA (93bp) protein (31aa)

This feature has no annotations

sw_5_scaffold_1460_29
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21970..23664
DNA (1695bp) protein (565aa)
Thermosome subunit 1 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XT80_NATM8
ths1; thermosome subunit 1
Thermosome subunit 1 {ECO:0000313|EMBL:CCQ37636.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (str
Displaying items 1-30 of 31 in total

View Taxonomy