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sw_5_scaffold_250

Search features with annotation key words

Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_250_1
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..96
DNA (96bp) protein (32aa)
Threonine synthase n=1 Tax=Halobacterium sp. DL1 RepID=G4IGX8_9EURY
Threonine synthase {ECO:0000313|EMBL:AHG03345.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_5_scaffold_250_2
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

544..1068
DNA (525bp) protein (175aa)
Polyketide cyclase/dehydrase family protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L595_HALJP
polyketide cyclase
Uncharacterized protein {ECO:0000313|EMBL:EMA22292.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
sw_5_scaffold_250_3

Not on your lists

comp(1065..1640)
DNA (576bp) protein (192aa)
Blue (Type 1) copper domain protein n=1 Tax=halophilic archaeon DL31 RepID=G2MJ69_9ARCH
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:AEN04618.1}; Flags: Precursor;; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_250_4
Haloferax lucentense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1684..2748)
DNA (1065bp) protein (355aa)
TET aminopeptidase-like protein (EC:3.4.11.-)
TET aminopeptidase-like protein n=1 Tax=Haloferax lucentense DSM 14919 RepID=M0GJM7_HALL2
TET aminopeptidase-like protein {ECO:0000313|EMBL:ELZ72456.1}; TaxID=1230452 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax lucentense (st
sw_5_scaffold_250_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2831..4144
DNA (1314bp) protein (438aa)
Peptidase M28 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N273_9EURY
Peptidase M28 {ECO:0000313|EMBL:EMA50810.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
peptidase M28
sw_5_scaffold_250_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

4187..4759
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SRY2_9EURY
redoxin
Redoxin {ECO:0000313|EMBL:ABG04046.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophil
sw_5_scaffold_250_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4772..5227)
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2DGL6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ05162.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_5_scaffold_250_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5278..6006)
DNA (729bp) protein (243aa)
ppnK_2; NAD(+) kinase 2 (inorganic polyphosphate/ATP-NAD kinase) (EC:2.7.1.23)
ATP-NAD kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRA0_9EURY
ATP-NAD kinase {ECO:0000313|EMBL:ELZ25790.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
sw_5_scaffold_250_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6049..6327)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1V9_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV49199.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_5_scaffold_250_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6337..6681)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSD4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92903.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_5_scaffold_250_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6709..7488)
DNA (780bp) protein (260aa)
Cytochrome b(C-terminal)/b6 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRD3_9EURY
Cytochrome b(C-terminal)/b6 {ECO:0000313|EMBL:ELZ25786.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadens
cytochrome b(C-terminal)/b6
sw_5_scaffold_250_12
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7490..8284)
DNA (795bp) protein (265aa)
petB; cytochrome bc1 complex cytochrome b subunit (EC:1.10.2.-)
Cytochrome bc1 complex cytochrome b subunit n=2 Tax=Haloferax RepID=M0GPH1_9EURY
Cytochrome bc1 complex cytochrome b subunit {ECO:0000313|EMBL:ELZ74136.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax la
sw_5_scaffold_250_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8281..9132)
DNA (852bp) protein (284aa)
Cytochrome bc1 complex Rieske iron-sulfur protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYU7_9EURY
Cytochrome bc1 complex Rieske iron-sulfur protein {ECO:0000313|EMBL:EMA50786.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
Rieske (2Fe-2S) domain-containing protein
sw_5_scaffold_250_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9478..10035)
DNA (558bp) protein (186aa)
Halocyanin hcpE n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSC9_9EURY
Halocyanin hcpE {ECO:0000313|EMBL:EFW92898.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253
blue (type 1) copper domain-containing protein
sw_5_scaffold_250_15
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10142..10954)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J0A1_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01783.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_5_scaffold_250_16
unknown

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comp(11129..11296)
DNA (168bp) protein (56aa)

This feature has no annotations

sw_5_scaffold_250_17
unknown

Not on your lists

comp(11269..11610)
DNA (342bp) protein (114aa)

This feature has no annotations

sw_5_scaffold_250_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11728..12225
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN46_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46164.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_250_19
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12197..12694)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EVT3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58802.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_5_scaffold_250_20
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12691..13377)
DNA (687bp) protein (229aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1230451 species=
nthA; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KTX6_HALAR
sw_5_scaffold_250_21
unknown

Not on your lists

13733..14278
DNA (546bp) protein (182aa)

This feature has no annotations

sw_5_scaffold_250_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14294..15076)
DNA (783bp) protein (261aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NH29_9EURY
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EMA55955.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
acyl-CoA dehydrogenase domain-containing protein
sw_5_scaffold_250_23
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15412..15849)
DNA (438bp) protein (146aa)
Halocyanin hcpB n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7R000_9EURY
Halocyanin hcpB {ECO:0000313|EMBL:EFW89894.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253
blue (type 1) copper domain-containing protein
sw_5_scaffold_250_24
unknown

Not on your lists

16260..16376
DNA (117bp) protein (39aa)

This feature has no annotations

sw_5_scaffold_250_25
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16366..17055)
DNA (690bp) protein (230aa)
Molybdopterin binding domain-containing protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WSF6_9EURY
Molybdopterin binding domain-containing protein {ECO:0000313|EMBL:ELY52136.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natron
cinA1; CinA N-terminal domain protein
sw_5_scaffold_250_26
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17089..17946)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRM7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36924.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_250_27
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17943..18617)
DNA (675bp) protein (225aa)
Hypotheical conserved protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A6A7_9EURY
Hypotheical conserved protein {ECO:0000313|EMBL:GAD53199.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.
hypothetical protein
sw_5_scaffold_250_28
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18617..19159)
DNA (543bp) protein (181aa)
Transcription factor E n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXK8_HALMD
transcription factor TFIIE subunit alpha
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
sw_5_scaffold_250_29
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19415..19963)
DNA (549bp) protein (183aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NP93_HALBP
hypothetical protein
sw_5_scaffold_250_30
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20034..20975
DNA (942bp) protein (314aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPV8_NATM8
NAD-dependent epimerase/dehydratase
GalE family epimerase/dehydratase {ECO:0000313|EMBL:CCQ36131.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moo
Displaying items 1-30 of 52 in total

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