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sw_5_scaffold_250_28

Organism: SW_5_Halobacteriales_68_49

near complete RP 16 / 55 MC: 2 BSCG 13 / 51 MC: 2 ASCG 35 / 38 MC: 2
Location: comp(18617..19159)

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor E n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXK8_HALMD similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 180.0
  • Bit_score: 298
  • Evalue 4.10e-78
transcription factor TFIIE subunit alpha similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 180.0
  • Bit_score: 298
  • Evalue 1.10e-78
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 180.0
  • Bit_score: 298
  • Evalue 5.70e-78

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Taxonomy

Halomicrobium mukohataei → Halomicrobium → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 543
ATGGCGTACGAGGAACTTCTGGAGGATCCGGTGATTCAAAAGTACCTCCACGAGCTCGTCGGCCCGACGGGGATGCCGGTCGCAGCGGCGCCCCCGGACGGCGAGGTGACGGACGAGGAGCTCGCCGAGGAGTTAGGGCTGGATCTGAACGACGTGCGGCGCGCGCTGTTTATCCTGTACGAGAACGACCTCGCGTCGTACCGCCGGCTCCGCGACGAGGACTCCGGCTGGCTCACGTATCTGTGGACCTTCCAGTACGACAACATCACGGAGAAACTGGAAGAAGAGATGCACCGGCTACTCGACGCGCTAGCCGAGCGGCGCGACTACGAGCGCAACAACGAGTTTTATCTCTGTGAACAGGATTCGATCCGCTTCGAGTTCGGCGAGGCGATGGAGTTCGGCTTCGAGTGTCCGAACTGCGGCGGTCAGCTGGTCGACATGGACAACGACCGGCTCGTCGACGCCATCGACCAGCGGATCGAGAAGCTCCGCGCCGAGTTGAACCGACCGCCCGAATCGGAGCCAGAGGCCGAAGCCTGA
PROTEIN sequence
Length: 181
MAYEELLEDPVIQKYLHELVGPTGMPVAAAPPDGEVTDEELAEELGLDLNDVRRALFILYENDLASYRRLRDEDSGWLTYLWTFQYDNITEKLEEEMHRLLDALAERRDYERNNEFYLCEQDSIRFEFGEAMEFGFECPNCGGQLVDMDNDRLVDAIDQRIEKLRAELNRPPESEPEAEA*