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sw_5_scaffold_2823

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_2823_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..886
DNA (885bp) protein (295aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D6N1_9EURY
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:ELZ31125.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="
dipeptidyl aminopeptidase/acylaminoacyl peptidase
sw_5_scaffold_2823_2
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(889..1362)
DNA (474bp) protein (158aa)
hypothetical protein id=24637347 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
Uncharacterized protein {ECO:0000313|EMBL:ERH04491.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
hypothetical protein
sw_5_scaffold_2823_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1422..2462)
DNA (1041bp) protein (347aa)
Signal recognition particle receptor FtsY n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUJ8_NATPD
ftsY; signal recognition particle receptor SRalpha
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobact
sw_5_scaffold_2823_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2464..2928)
DNA (465bp) protein (155aa)
Prefoldin subunit alpha n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5Z3_9EURY
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
pfdA; prefoldin alpha subunit
sw_5_scaffold_2823_5
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2925..3098)
DNA (174bp) protein (58aa)
50S ribosomal protein L18Ae n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRP0_HALBP
50S ribosomal protein Lx
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; TaxID=469382 sp
sw_5_scaffold_2823_6
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3177..4313)
DNA (1137bp) protein (379aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D3T2_HALXS
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:AEH38585.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger
sw_5_scaffold_2823_7
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4586..5083
DNA (498bp) protein (166aa)
Transposase IS1341 n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SNV6_9EURY
Transposase, IS605 OrfB family {ECO:0000313|EMBL:AKH97483.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarch
IS1341-type transposase
sw_5_scaffold_2823_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5111..5752
DNA (642bp) protein (214aa)
Transposase, IS605 OrfB family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPH0_HALUD
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:ACV12725.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensi
sw_5_scaffold_2823_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5764..6492)
DNA (729bp) protein (243aa)
Translation initiation factor 6 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNL6_NATM8
tif6; translation initiation factor aIF-6
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Displaying 9 items

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