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sw_5_scaffold_3009

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_3009_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..1463)
DNA (1461bp) protein (487aa)
gltB; glutamate synthase large subunit (EC:1.4.1.13)
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:ACV49240.1}; EC=1.4.7.1 {ECO:0000313|EMBL:ACV49240.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Glutamate synthase large subunit n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V5G7_HALMA
sw_5_scaffold_3009_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1619..2707)
DNA (1089bp) protein (363aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=931277 species="Archaea; Euryarc
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MJS4_HALMO
sw_5_scaffold_3009_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2662..3036)
DNA (375bp) protein (125aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
Prolyl-tRNA synthetase n=1 Tax=halophilic archaeon J07HX64 RepID=U1P2I4_9EURY
Suspect SCG annotation. See neighboring gene [sw_5_scaffold_3009_2].
Prolyl-tRNA synthetase {ECO:0000313|EMBL:ERH10860.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_5_scaffold_3009_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3265..3696
DNA (432bp) protein (144aa)
hypothetical protein id=24614532 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ESP89044.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halob
hypothetical protein
sw_5_scaffold_3009_5
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3698..3925)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PEJ3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA68313.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_5_scaffold_3009_6
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4002..4364)
DNA (363bp) protein (121aa)
Branched-chain amino acid transport n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUJ3_PARL1
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KFX71533.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;
branched-chain amino acid transport
sw_5_scaffold_3009_7
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4361..5062)
DNA (702bp) protein (234aa)
Branched-chain amino acid transport protein AzlC n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KSJ7_9EURY
branched-chain amino acid ABC transporter permease
Branched-chain amino acid transport protein AzlC {ECO:0000313|EMBL:EMA24201.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Ha
sw_5_scaffold_3009_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5129..6496)
DNA (1368bp) protein (456aa)
FAD-dependent oxidoreductase (Homolog to geranylgeranyl reductase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQR5_NATM8
FAD-dependent oxidoreductase (homolog to geranylgeranyl reductase)
FAD-dependent oxidoreductase (Homolog to geranylgeranyl reductase) {ECO:0000313|EMBL:CCQ36502.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
sw_5_scaffold_3009_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6601..6834)
DNA (234bp) protein (78aa)
korB; 2-oxoglutarate ferredoxin oxidoreductase subunit beta (EC:1.2.7.3)
Oxoglutarate--ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:CAI49597.1}; EC=1.2.7.3 {ECO:0000313|EMBL:CAI49597.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
Oxoglutarate--ferredoxin oxidoreductase beta subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQJ8_NATPD
Displaying 9 items

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