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sw_5_scaffold_482

Search features with annotation key words

Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_482_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(31..1002)
DNA (972bp) protein (324aa)
mvaD; diphosphomevalonate decarboxylase (EC:4.1.1.33)
Phosphomevalonate decarboxylase {ECO:0000313|EMBL:CAI48881.1}; EC=4.1.1.- {ECO:0000313|EMBL:CAI48881.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Diphosphomevalonate decarboxylase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISK5_NATPD
sw_5_scaffold_482_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1293..1715
DNA (423bp) protein (141aa)
Cox cluster protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIK3_9EURY
cox cluster protein
Cox cluster protein {ECO:0000313|EMBL:ERJ04598.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;"
sw_5_scaffold_482_3

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1769..2128
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZWX0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07480.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
cox cluster protein
sw_5_scaffold_482_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2201..4030
DNA (1830bp) protein (610aa)
Cytochrome c oxidase, subunit I n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWS3_HALMD
cytochrome C oxidase subunit I
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ACV48283.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source
sw_5_scaffold_482_5
unknown

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comp(4041..4136)
DNA (96bp) protein (32aa)

This feature has no annotations

sw_5_scaffold_482_6
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4196..4468
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KBG6_HALAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA15691.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
sw_5_scaffold_482_7

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4506..5342
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XCD1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS05589.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_5_scaffold_482_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5330..6013)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A4P9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60448.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
thioredoxin
sw_5_scaffold_482_9
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6015..6758)
DNA (744bp) protein (248aa)
Putative branched-chain amino acids ABC transporter ATP-binding protein n=3 Tax=Haloferax RepID=L5NW56_9EURY
Putative branched-chain amino acids ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ92234.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
livF1; putative branched-chain amino acids ABC transporter ATP-binding protein
sw_5_scaffold_482_10

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comp(6755..7525)
DNA (771bp) protein (257aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y3J8_9ARCH
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ESS05592.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
livG2; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
sw_5_scaffold_482_11

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comp(7518..8759)
DNA (1242bp) protein (414aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=uncultured archaeon A07HR60 RepID=V4YD46_9ARCH
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ESS12973.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
livM1; branched-chain amino acid ABC transporter permease
sw_5_scaffold_482_12

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comp(8756..9706)
DNA (951bp) protein (317aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=uncultured archaeon A07HB70 RepID=V4XCD5_9ARCH
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ESS05594.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
livH1; putative branched-chain amino acids ABC transporter permease
sw_5_scaffold_482_13
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9831..11159)
DNA (1329bp) protein (443aa)
Branched-chain amino acid ABC transporter amino acid-binding protein n=2 Tax=Haloarcula RepID=M0JUU8_9EURY
Branched-chain amino acid ABC transporter amino acid-binding protein {ECO:0000313|EMBL:EMA12153.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloa
livK-2; branched-chain amino acid ABC transporter amino acid-binding protein
sw_5_scaffold_482_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11265..11648)
DNA (384bp) protein (128aa)
Acetyl-CoA synthetase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVE9_9EURY
AMP-dependent synthetase and ligase
Acetyl-CoA synthetase {ECO:0000313|EMBL:EMA49313.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
sw_5_scaffold_482_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11648..12112)
DNA (465bp) protein (155aa)
acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-CoA synthetase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFP0_9EURY
Acetyl-CoA synthetase {ECO:0000313|EMBL:EMA44193.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DS
Displaying 15 items

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