ggKbase home page

sw_5_scaffold_491

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_491_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

214..690
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2N0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52202.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_5_scaffold_491_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

900..1757
DNA (858bp) protein (286aa)
Protein-export membrane protein SecF n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2E0_9EURY
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
secF; preprotein translocase subunit SecF
sw_5_scaffold_491_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1754..3301
DNA (1548bp) protein (516aa)
Protein-export membrane protein SecD n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4E5_9EURY
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
secD; preprotein translocase subunit SecD
sw_5_scaffold_491_4
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3390..4763
DNA (1374bp) protein (458aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DK10_9EURY
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ELZ35158.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorub
sub; peptidase S8 and S53 subtilisin kexin sedolisin
sw_5_scaffold_491_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4783..5409)
DNA (627bp) protein (209aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=1417673 species="Archaea; Euryarchaeota; H
Ribonuclease HII n=2 Tax=Haloarcula hispanica RepID=G0HTN6_HALHT
sw_5_scaffold_491_6
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5566..6003)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CK71_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23003.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
sw_5_scaffold_491_7
unknown

Not on your lists

comp(6269..6490)
DNA (222bp) protein (74aa)

This feature has no annotations

sw_5_scaffold_491_8
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6619..7914)
DNA (1296bp) protein (432aa)
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=1033806
tRNA pseudouridine 55 synthase archaea n=2 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJ18_9EURY
tRNA pseudouridine 55 synthase archaea
sw_5_scaffold_491_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8122..8256
DNA (135bp) protein (45aa)
Uncharacterized protein {ECO:0000313|EMBL:CDN30066.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_491_10
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8257..9003)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SRU2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA13283.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
sw_5_scaffold_491_11
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9101..10072
DNA (972bp) protein (324aa)
Endonuclease nuclease-like protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L749_HALJP
Endonuclease nuclease-like protein {ECO:0000313|EMBL:EMA28918.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japon
nuc; endonuclease nuclease-like protein
sw_5_scaffold_491_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10069..10530)
DNA (462bp) protein (154aa)
rRNA maturation endonuclease Nob1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMS3_NATPD
hypothetical protein
rRNA maturation endonuclease Nob1 {ECO:0000313|EMBL:CAI50584.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pha
sw_5_scaffold_491_13
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10530..10766)
DNA (237bp) protein (79aa)
PRC-barrel domain-containing protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AGF9_NATGS
hypothetical protein
PRC-barrel domain-containing protein {ECO:0000313|EMBL:ELY62358.1}; Uncharacterized protein {ECO:0000313|EMBL:AFZ72242.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Nat
sw_5_scaffold_491_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10874..11338
DNA (465bp) protein (155aa)
Blue (Type 1) copper domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2W2_HALMD
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ACV47434.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
Displaying 14 items

View Taxonomy