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sw_5_scaffold_512

Search features with annotation key words

Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_512_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..661
DNA (660bp) protein (220aa)
adh; alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CV29_9EURY
Alcohol dehydrogenase {ECO:0000313|EMBL:ELZ27065.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM
sw_5_scaffold_512_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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969..1388
DNA (420bp) protein (140aa)
Iron-sulfur cluster assembly protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITH2_NATPD
nitrogen fixation protein NifU
Iron-sulfur cluster assembly protein {ECO:0000313|EMBL:CAI48561.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_5_scaffold_512_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1546..2427
DNA (882bp) protein (294aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriac
2-dehydropantoate 2-reductase n=1 Tax=Halomicrobium katesii RepID=UPI00035C4F6F
sw_5_scaffold_512_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2455..2781
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6B1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ30232.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_5_scaffold_512_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3068..3412
DNA (345bp) protein (115aa)
Homolog to ribonuclease R n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN44_NATM8
homolog to ribonuclease R
Homolog to ribonuclease R {ECO:0000313|EMBL:CCQ35304.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_5_scaffold_512_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3402..4382
DNA (981bp) protein (327aa)
Homolog to ribonuclease R n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN44_NATM8
homolog to ribonuclease R
Homolog to ribonuclease R {ECO:0000313|EMBL:CCQ35304.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_5_scaffold_512_7
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4449..6011
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NPB0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKF39737.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
sw_5_scaffold_512_8

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comp(6077..7297)
DNA (1221bp) protein (407aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y8C7_9ARCH
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ESS11178.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
inner-membrane translocator
sw_5_scaffold_512_9

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comp(7298..8656)
DNA (1359bp) protein (453aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR60 RepID=V4YIM2_9ARCH
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ESS11177.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;
extracellular ligand-binding receptor
sw_5_scaffold_512_10
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8767..9696
DNA (930bp) protein (310aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=24635988 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERH03666.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halor
inner-membrane translocator
sw_5_scaffold_512_11
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9693..10535
DNA (843bp) protein (281aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein id=24635987 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERH03665.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorub
ABC transporter
sw_5_scaffold_512_12

Not on your lists

10532..11251
DNA (720bp) protein (240aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein id=24635986 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ESS11174.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ABC transporter
sw_5_scaffold_512_13

Not on your lists

11305..12954
DNA (1650bp) protein (550aa)
Acyl-coenzyme A synthetase/AMP-(Fatty) acid ligase n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y8C4_9ARCH
Acyl-coenzyme A synthetase/AMP-(Fatty) acid ligase {ECO:0000313|EMBL:ESS11173.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
AMP-dependent synthetase and ligase
sw_5_scaffold_512_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12973..13782)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI70_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45417.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_512_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13829..14377)
DNA (549bp) protein (183aa)
metX; homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; TaxID=268739 species="
Homoserine O-acetyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNU4_NATM8
sw_5_scaffold_512_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14898..16031)
DNA (1134bp) protein (378aa)
metY_1; O-acetylhomoserine aminocarboxypropyltransferase 1, methionine synthase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase 1, methionine synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAC9_9EURY
O-acetylhomoserine aminocarboxypropyltransferase 1, methionine synthase {ECO:0000313|EMBL:EMA42706.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
Displaying 16 items

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