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sw_5_scaffold_955

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_955_1
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(30..239)
DNA (210bp) protein (70aa)
PilT protein domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NM81_HALUD
PilT protein domain protein
PilT protein domain protein {ECO:0000313|EMBL:ACV11289.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (
sw_5_scaffold_955_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(236..484)
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Haloquadratum walsbyi RepID=Q18EN0_HALWD
hypothetical protein
DUF217 family protein {ECO:0000313|EMBL:CAJ53593.2}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain D
sw_5_scaffold_955_3
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

617..895
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PUT4_9EURY
AbrB family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EMA72600.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
sw_5_scaffold_955_4
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

920..1333
DNA (414bp) protein (138aa)
PilT protein domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJJ3_9EURY
Twitching motility protein PilT {ECO:0000313|EMBL:AHG05553.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp.
conserved hypothetical PilT domain protein
sw_5_scaffold_955_5
unknown

Not on your lists

comp(1610..1987)
DNA (378bp) protein (126aa)

This feature has no annotations

sw_5_scaffold_955_6
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2183..3520)
DNA (1338bp) protein (446aa)
Potassium transporter peripheral membrane component n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0FXI5_9EURY
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:ELZ63957.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halo
potassium transporter TrkA
sw_5_scaffold_955_7
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3714..5267)
DNA (1554bp) protein (518aa)
Trk-type potassium transport system, permease protein TrkH / cation transporter n=2 Tax=Haloarcula hispanica RepID=G0HYK8_HALHT
potassium transporter TrkH
Trk-type potassium transport system, permease protein TrkH / cation transporter {ECO:0000313|EMBL:AEM58909.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
sw_5_scaffold_955_8

Not on your lists

comp(5357..6463)
DNA (1107bp) protein (369aa)
Threonine dehydrogenase related Zn-dependent dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y233_9ARCH
Threonine dehydrogenase related Zn-dependent dehydrogenase {ECO:0000313|EMBL:ESS06651.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
threonine dehydrogenase
sw_5_scaffold_955_9
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6581..8326)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J017_HALVA
Uncharacterized protein {ECO:0000313|EMBL:CQR50914.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_5_scaffold_955_10
unknown

Not on your lists

8425..8919
DNA (495bp) protein (165aa)

This feature has no annotations

sw_5_scaffold_955_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8981..10243
DNA (1263bp) protein (421aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=797114 species="Archaea; Euryarchaeota; Halob
polY; DNA polymerase Y (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CM29_9EURY
sw_5_scaffold_955_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10281..10568
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QST7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92496.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_5_scaffold_955_13

Not on your lists

10687..11601
DNA (915bp) protein (305aa)
Restriction endonuclease n=1 Tax=uncultured archaeon A07HR67 RepID=V4X4W6_9ARCH
Restriction endonuclease {ECO:0000313|EMBL:ESS02614.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
HNH endonuclease
sw_5_scaffold_955_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11598..13289
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRR1_NATPD
ATPase
DUF87 domain protein {ECO:0000313|EMBL:CAI49181.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strai
Displaying 14 items

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