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RAAC3_TM7_1

Alias: TM7_RAAC3

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Displaying items 1-30 of 961 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RAAC3_TM7_1_1
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(1..1149)
DNA (1149bp) protein (383aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AHB41878.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=14 to=37 evalue=0.024 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
RAAC3_TM7_1_2
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(1197..3035)
DNA (1839bp) protein (613aa)
GTP-binding protein TypA n=3 Tax=Saccharobacteria RepID=UPI00016B2547 rbh
GTP-binding protein TypA {ECO:0000313|EMBL:AHB41879.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
GTP-binding protein TypA rbh
TypA_BipA: GTP-binding protein TypA/BipA (db=HMMTigr db_id=TIGR01394 from=12 to=608 evalue=0.0 interpro_id=IPR006298 interpro_description=GTP-binding protein TypA GO=Molecular Function: GTP binding (GO:0005525), Cellular Component: intracellular (GO:0005622))
RAAC3_TM7_1_3
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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3105..3662
DNA (558bp) protein (186aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AHB41880.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
seg (db=Seg db_id=seg from=1 to=12)
RAAC3_TM7_1_4
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(3674..6406)
DNA (2733bp) protein (911aa)
Chromosome condensation regulator RCC1 {ECO:0000313|EMBL:AHB41881.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
chromosome condensation regulator RCC1 rbh
chromosome condensation regulator RCC1 alias=TM7_RAAC3_4 id=5225946 tax=RAAC3_TM7 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi
transmembrane_regions (db=TMHMM db_id=tmhmm from=16 to=38)
RAAC3_TM7_1_T5
unknown

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comp(6534..6607)
DNA (74bp)
transferRNA
RAAC3_TM7_1_5
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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6813..7079
DNA (267bp) protein (89aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB41882.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=17 to=34)
RAAC3_TM7_1_6
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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7201..7509
DNA (309bp) protein (103aa)
RNP-1 like RNA-binding protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRV2_9BACT
RNP-1 like protein RNA-binding protein {ECO:0000313|EMBL:AHB41883.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
RNP-1 like protein RNA-binding protein
no description (db=Gene3D db_id=G3DSA:3.30.70.330 from=5 to=96 evalue=1.4e-29 interpro_id=IPR012677 interpro_description=Nucleotide-binding, alpha-beta plait GO=Molecular Function: nucleotide binding (GO:0000166))
RAAC3_TM7_1_7
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(7553..7924)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6V067_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AHB41884.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
RAAC3_TM7_1_8
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(7914..8477)
DNA (564bp) protein (188aa)
Ham1 family protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRV3_9BACT
Ham1 family protein {ECO:0000313|EMBL:AHB41885.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
Ham1 family protein rbh
(db=HMMPfam db_id=PF01725 from=5 to=163 evalue=1.2e-34 interpro_id=IPR002637 interpro_description=Ham1-like protein GO=Molecular Function: hydrolase activity (GO:0016787))
RAAC3_TM7_1_9
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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8584..9174
DNA (591bp) protein (197aa)
Metal dependent phosphohydrolase n=1 Tax=sediment metagenome RepID=D9PLP5_9ZZZZ
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AHB41886.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
Metal dependent phosphohydrolase rbh
coiled-coil (db=Coil db_id=coil from=84 to=108 evalue=NA)
RAAC3_TM7_1_10
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(9176..9919)
DNA (744bp) protein (248aa)
Putative ABC transporter permease protein n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E1T1_9MICO
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
hypothetical protein rbh
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=44)
RAAC3_TM7_1_11
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(9919..10683)
DNA (765bp) protein (255aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3THR0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:AHB41888.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
hypothetical protein rbh
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=149 to=163 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
RAAC3_TM7_1_12
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(10631..10879)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ENG6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHB41889.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
hypothetical protein
(db=HMMPfam db_id=PF07866 from=12 to=76 evalue=1.5e-24 interpro_id=IPR023387 interpro_description=DUF1653-like domain)
RAAC3_TM7_1_13
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(10876..11286)
DNA (411bp) protein (137aa)
hypothetical protein COdytL_13094 n=1 Tax=Candidatus Odyssella thessalonicensis L13 RepID=UPI000225AA06
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB41890.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
seg (db=Seg db_id=seg from=79 to=97)
RAAC3_TM7_1_14
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(11288..11614)
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Bacillus methanolicus RepID=I3DXC8_BACMT
Uncharacterized protein {ECO:0000313|EMBL:AHB41891.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
hypothetical protein
seg (db=Seg db_id=seg from=63 to=77)
RAAC3_TM7_1_15
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(11611..13656)
DNA (2046bp) protein (682aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1394711 species="Bacteri
DNA ligase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRV4_9BACT rbh
DNA ligase rbh
(db=HMMPfam db_id=PF01653 from=18 to=334 evalue=1.6e-103 interpro_id=IPR013839 interpro_description=NAD-dependent DNA ligase, adenylation GO=Molecular Function: DNA ligase (NAD+) activity (GO:0003911))
RAAC3_TM7_1_16
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(13604..14698)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRV5_9BACT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AHB41893.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=77)
RAAC3_TM7_1_17
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(14703..15578)
DNA (876bp) protein (292aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibact
UPI000262A0D1 related cluster n=1 Tax=unknown RepID=UPI000262A0D1 rbh
hypothetical protein rbh
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
RAAC3_TM7_1_18
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(15612..16175)
DNA (564bp) protein (188aa)
LemA-like protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B255F
LemA-like protein {ECO:0000313|EMBL:AHB41895.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
LemA-like protein rbh
coiled-coil (db=Coil db_id=coil from=112 to=140 evalue=NA)
RAAC3_TM7_1_T19
unknown

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comp(16273..16358)
DNA (86bp)
transferRNA
RAAC3_TM7_1_19
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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16408..16860
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EMD4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:AHB41896.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
hypothetical protein rbh
seg (db=Seg db_id=seg from=54 to=65)
RAAC3_TM7_1_T20
unknown

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comp(16872..16942)
DNA (71bp)
transferRNA
RAAC3_TM7_1_20
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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17012..17521
DNA (510bp) protein (170aa)
Cytidyltransferase-related domain n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSW3_9BACT
Cytidyltransferase-related protein {ECO:0000313|EMBL:AHB41897.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
Cytidyltransferase-related protein rbh
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=3 to=143 evalue=1.3e-22 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
RAAC3_TM7_1_T21
unknown

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comp(17559..17643)
DNA (85bp)
transferRNA
RAAC3_TM7_1_22
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(17773..19575)
DNA (1803bp) protein (601aa)
Extracellular solute-binding protein n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SLA8_9CHLR
Extracellular solute-binding protein {ECO:0000313|EMBL:AHB41898.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
Extracellular solute-binding protein rbh
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
RAAC3_TM7_1_23
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(19588..19824)
DNA (237bp) protein (79aa)
hypothetical protein cdiviTM7_00165 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2548
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB41899.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
RAAC3_TM7_1_24
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(19831..20226)
DNA (396bp) protein (132aa)
hypothetical protein cdiviTM7_00170 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2549
Uncharacterized protein {ECO:0000313|EMBL:AHB41900.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
RAAC3_TM7_1_25
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(20254..21453)
DNA (1200bp) protein (400aa)
Aminopeptidase P {ECO:0000313|EMBL:AHB41901.1}; EC=3.4.11.9 {ECO:0000313|EMBL:AHB41901.1};; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacteriu
pepP; aminopeptidase P (EC:3.4.11.9) rbh
pepP; aminopeptidase P (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] alias=RAAC4_OD1_25 id=5225966 tax=RAAC3_TM7 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes
coiled-coil (db=Coil db_id=coil from=301 to=322 evalue=NA)
RAAC3_TM7_1_26
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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comp(21491..22468)
DNA (978bp) protein (326aa)
Laminin G sub domain 2 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XU25_9BACT
Laminin G sub protein {ECO:0000313|EMBL:AHB41902.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
Laminin G sub protein rbh
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
RAAC3_TM7_1_28
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(22481..24034)
DNA (1554bp) protein (518aa)
excinuclease ABC subunit C n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B254A rbh
UvrABC system protein C {ECO:0000256|SAAS:SAAS00125834}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
excinuclease ABC subunit C rbh
coiled-coil (db=Coil db_id=coil from=199 to=220 evalue=NA)
Displaying items 1-30 of 961 in total

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