ggKbase home page

RAAC3_TM7_1_28 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
excinuclease ABC subunit C n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B254A rbh similarity UNIREF
DB: UNIREF90
64.0 0.0 676 8.00e+00 sbe:RAAC3_TM7C01G0030
UvrABC system protein C {ECO:0000256|SAAS:SAAS00125834}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;" UNIPROT
DB: UniProtKB
99.8 517.0 1015 3.40e-293 V5RU53_9BACT
excinuclease ABC subunit C rbh similarity KEGG
DB: KEGG
99.8 517.0 1015 6.90e-294 sbe:RAAC3_TM7C01G0030
coiled-coil (db=Coil db_id=coil from=199 to=220 evalue=NA) iprscan interpro
DB: Coil
0.0 0.0 0 0.0 sbe:RAAC3_TM7C01G0030
(db=HMMPfam db_id=PF02151 from=199 to=230 evalue=2.2e-07 interpro_id=IPR001943 interpro_description=UvrB/UvrC protein GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 2.00e+00 sbe:RAAC3_TM7C01G0030
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=14 to=99 evalue=2.4e-21 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 sbe:RAAC3_TM7C01G0030
no description (db=HMMSmart db_id=SM00465 from=15 to=97 evalue=3.7e-15 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 3.00e+00 sbe:RAAC3_TM7C01G0030
no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=463 to=516 evalue=4.9e-06) iprscan interpro
DB: Gene3D
0.0 0.0 0 4.00e+00 sbe:RAAC3_TM7C01G0030
(db=HMMPfam db_id=PF08459 from=254 to=383 evalue=6.4e-39 interpro_id=IPR001162 interpro_description=Excinuclease ABC, C subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 6.00e+00 sbe:RAAC3_TM7C01G0030
(db=HMMPfam db_id=PF01541 from=16 to=92 evalue=8.7e-08 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 8.00e+00 sbe:RAAC3_TM7C01G0030
RuvA domain 2-like (db=superfamily db_id=SSF47781 from=438 to=513 evalue=8.0e-16 interpro_id=IPR010994 interpro_description=RuvA domain 2-like) iprscan interpro
DB: superfamily
0.0 0.0 0 8.00e+00 sbe:RAAC3_TM7C01G0030
C-terminal UvrC-binding domain of UvrB (db=superfamily db_id=SSF46600 from=181 to=236 evalue=8.7e-10 interpro_id=IPR009055 interpro_description=UvrB, C-terminal UvrC-binding GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: superfamily
0.0 0.0 0 8.00e+00 sbe:RAAC3_TM7C01G0030
UVR (db=ProfileScan db_id=PS50151 from=196 to=231 evalue=11.294 interpro_id=IPR001943 interpro_description=UvrB/UvrC protein GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.10e+01 sbe:RAAC3_TM7C01G0030
UVRC_1 (db=ProfileScan db_id=PS50164 from=16 to=93 evalue=24.684 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 2.40e+01 sbe:RAAC3_TM7C01G0030
UVRC_2 (db=ProfileScan db_id=PS50165 from=184 to=347 evalue=28.315 interpro_id=IPR001162 interpro_description=Excinuclease ABC, C subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 2.80e+01 sbe:RAAC3_TM7C01G0030