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S_2p5_S6_coassembly_Nitrospirae_58_88

In projects: GD2017-1_S_2p5_S6_Biohub_coassembly  |  genasci-metabolism  |  all_nc_groundwater_genomes

Consensus taxonomy: Nitrospirae  →  Bacteria

Description

GD17-1_S2p5_coassembly_CONCOCT_128 RK

Displaying items 1-50 of 246 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
S_2p5_S6_coassembly_k141_3850513
Domain: Bacteria (75%)
4 3025 bp 57.82 94.81 64.26
S_2p5_S6_coassembly_k141_4367340
Species: RBG_19FT_COMBO_Nitrospirae_42_15_curated (50%)
4 2707 bp 57.33 92.54 66.72
S_2p5_S6_coassembly_k141_4932014
Domain: Bacteria (85.71%)
7 3154 bp 56.63 75.76 67.82
S_2p5_S6_coassembly_k141_4784984
Domain: Bacteria (60%)
5 3329 bp 60.29 90.07 77.32
S_2p5_S6_coassembly_k141_433968
Class: Deltaproteobacteria (66.67%)
3 2943 bp 56.30 93.22 77.68
S_2p5_S6_coassembly_k141_3175452
Phylum: Nitrospirae (60%)
10 11739 bp 57.29 92.17 80.07
S_2p5_S6_coassembly_k141_3715705
Domain: Bacteria (88.89%)
9 5694 bp 54.81 74.95 80.24
S_2p5_S6_coassembly_k141_2974909
Domain: Bacteria (50%)
12 7113 bp 54.97 86.44 82.31
S_2p5_S6_coassembly_k141_350418
Phylum: Nitrospirae (85.71%)
7 4190 bp 54.53 77.47 82.55
S_2p5_S6_coassembly_k141_335264
Phylum: Nitrospirae (66.67%)
3 3131 bp 56.53 95.58 82.79
S_2p5_S6_coassembly_k141_445640
Domain: Bacteria (64.29%)
14 11551 bp 54.16 77.46 83.34
S_2p5_S6_coassembly_k141_3299390
Domain: Bacteria (100%)
3 3052 bp 57.60 85.42 83.36
S_2p5_S6_coassembly_k141_1080657
Phylum: Nitrospirae (80%)
5 3688 bp 57.89 84.44 84.35
S_2p5_S6_coassembly_k141_3722231
Phylum: Nitrospirae (60%)
10 6767 bp 53.97 75.54 84.68
S_2p5_S6_coassembly_k141_4883436
Phylum: Nitrospirae (80%)
5 4861 bp 55.87 93.47 84.86
S_2p5_S6_coassembly_k141_1070094
Species: R_Nitrospirae_66_17 (60%)
5 4173 bp 57.01 87.60 85.19
S_2p5_S6_coassembly_k141_2977386
Phylum: Nitrospirae (60%)
10 6780 bp 56.78 89.78 85.22
S_2p5_S6_coassembly_k141_4360389
Domain: Bacteria (95.65%)
23 19958 bp 56.65 81.36 85.42
S_2p5_S6_coassembly_k141_504364
Species: RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated (50%)
4 4596 bp 57.14 84.50 85.51
S_2p5_S6_coassembly_k141_1737313
Phylum: Nitrospirae (75%)
4 2600 bp 58.85 83.25 85.62
S_2p5_S6_coassembly_k141_4300350
Domain: Bacteria (81.82%)
11 5636 bp 54.13 87.00 86.18
S_2p5_S6_coassembly_k141_2281277
Domain: Bacteria (75%)
16 10925 bp 56.02 83.18 86.31
S_2p5_S6_coassembly_k141_2209675
Domain: Bacteria (100%)
5 5995 bp 58.52 82.89 86.57
S_2p5_S6_coassembly_k141_5166051
Phylum: Nitrospirae (53.33%)
15 12069 bp 55.37 84.49 86.88
S_2p5_S6_coassembly_k141_1730822
Species: R_Nitrospirae_66_17 (75%)
4 2993 bp 57.20 78.93 87.10
S_2p5_S6_coassembly_k141_3205950
Domain: Bacteria (84.62%)
13 14042 bp 53.03 77.73 87.17
S_2p5_S6_coassembly_k141_3868981
Domain: Bacteria (80.95%)
21 17811 bp 55.79 89.35 87.63
S_2p5_S6_coassembly_k141_498555
Phylum: Nitrospirae (50%)
4 2954 bp 56.57 84.60 87.64
S_2p5_S6_coassembly_k141_5034896
Phylum: Nitrospirae (71.43%)
7 5165 bp 54.42 74.78 87.71
S_2p5_S6_coassembly_k141_4992547
Domain: Bacteria (78.95%)
19 15397 bp 54.91 82.99 87.84
S_2p5_S6_coassembly_k141_2885717
Phylum: Nitrospirae (50%)
4 3885 bp 59.67 92.86 87.88
S_2p5_S6_coassembly_k141_2760733
Domain: Bacteria (90.91%)
11 9966 bp 56.19 88.55 88.08
S_2p5_S6_coassembly_k141_4632042
Species: GWA2_Nitrospirae_42_11_curated (50%)
2 3085 bp 56.34 77.94 88.10
S_2p5_S6_coassembly_k141_5100344
Species: GWC2_Nitrospirae_56_14_curated (50%)
4 3840 bp 59.48 95.66 88.13
S_2p5_S6_coassembly_k141_2289724
Domain: Bacteria (80%)
5 3256 bp 58.69 87.35 88.24
S_2p5_S6_coassembly_k141_1401129
Domain: Bacteria (66.67%)
6 4495 bp 57.62 81.62 88.50
S_2p5_S6_coassembly_k141_3258551
Domain: Bacteria (76.92%)
13 11547 bp 59.07 89.04 88.56
S_2p5_S6_coassembly_k141_1918869
Phylum: Nitrospirae (58.33%)
12 9033 bp 59.01 88.23 88.71
S_2p5_S6_coassembly_k141_573873
Domain: Bacteria (66.67%)
3 2773 bp 58.96 85.74 88.93
S_2p5_S6_coassembly_k141_2558969
Species: R_Nitrospirae_66_17 (50%)
12 6794 bp 55.81 86.30 88.95
S_2p5_S6_coassembly_k141_1091094
Phylum: Nitrospirae (50%)
8 6051 bp 59.64 79.67 88.99
S_2p5_S6_coassembly_k141_4295152
Phylum: Nitrospirae (80%)
5 3812 bp 55.98 83.50 89.09
S_2p5_S6_coassembly_k141_3029595
Phylum: Nitrospirae (55.56%)
9 9331 bp 57.15 80.81 89.11
S_2p5_S6_coassembly_k141_1918405
Phylum: Nitrospirae (53.33%)
15 10767 bp 57.86 85.22 89.16
S_2p5_S6_coassembly_k141_1101611
Class: Deltaproteobacteria (75%)
4 3977 bp 58.89 91.31 89.16
S_2p5_S6_coassembly_k141_1988319
Domain: Bacteria (57.14%)
7 3699 bp 59.45 77.62 89.21
S_2p5_S6_coassembly_k141_3122969
Phylum: Nitrospirae (77.78%)
9 4772 bp 57.59 82.86 89.23
S_2p5_S6_coassembly_k141_4449910
Phylum: Nitrospirae (66.67%)
3 3597 bp 56.57 79.69 89.24
S_2p5_S6_coassembly_k141_267366
Class: Deltaproteobacteria (60%)
5 4078 bp 60.30 83.39 89.46
S_2p5_S6_coassembly_k141_2364682
Species: R_Nitrospirae_62_14 (60%)
5 3665 bp 57.46 91.51 89.47
Displaying items 1-50 of 246 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.