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AMDSBA1_62

Alias: AMDSBA1_C61

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA1_62_1
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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105..1364
-----------------
DNA (1260bp)
protein (420aa)
hypothetical protein
Major facilitator superfamily MFS_1 n=1 Tax=Acidobacterium sp. MP5ACTX9 RepID=E8X312_ACISM (db=UNIREF evalue=3.3e-10 bit_score=72.0 identity=20.7 coverage=94.04761904761905)
transmembrane_regions (db=TMHMM db_id=tmhmm from=175 to=192)
transmembrane_regions (db=TMHMM db_id=tmhmm from=235 to=257)
AMDSBA1_62_2
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2290..2934
-----------------
DNA (645bp)
protein (215aa)
O-methyltransferase family 3
O-methyltransferase mdmC n=2 Tax=Waddlia chondrophila RepID=F8LD54_9CHLA (db=UNIREF evalue=2.5e-38 bit_score=164.5 identity=39.5 coverage=95.81395348837209)
(db=HMMPfam db_id=PF01596 from=16 to=209 evalue=8.6e-54 interpro_id=IPR002935 interpro_description=O-methyltransferase, family 3 GO=Molecular Function: O-methyltransferase activity (GO:0008171))
O-METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10509 from=6 to=211 evalue=3.1e-53 interpro_id=IPR002935 interpro_description=O-methyltransferase, family 3 GO=Molecular Function: O-methyltransferase activity (GO:0008171))
AMDSBA1_62_3
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3481..5403
-----------------
DNA (1923bp)
protein (641aa)
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase
ACETYL-COENZYME A SYNTHETASE (ACETATE--COA LIGASE) (db=HMMPanther db_id=PTHR11968:SF42 from=16 to=621 evalue=8.6e-212)
ATP-DEPENDENT AMP-BINDING ENZYME FAMILY MEMBER (db=HMMPanther db_id=PTHR11968 from=16 to=621 evalue=8.6e-212)
AMDSBA1_62_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6265..6729
-----------------
DNA (465bp)
protein (155aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWG7_9FIRM (db=UNIREF evalue=4.1e-46 bit_score=189.9 identity=67.2 coverage=85.80645161290322)
transmembrane_regions (db=TMHMM db_id=tmhmm from=117 to=139)
transmembrane_regions (db=TMHMM db_id=tmhmm from=80 to=102)
AMDSBA1_62_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7065..8558
-----------------
DNA (1494bp)
protein (498aa)
RmuC-domain-containing protein
RmuC-domain-containing protein
hypothetical protein LchrJ3_14167 n=1 Tax=Leucobacter chromiiresistens JG 31 RepID=UPI000262A530 (db=UNIREF evalue=3.7e-101 bit_score=374.4 identity=46.8 coverage=81.72690763052208)
AMDSBA1_62_6
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8764..9582)
-----------------
DNA (819bp)
protein (273aa)
undecaprenyl pyrophosphate phosphatase
Undecaprenyl-diphosphatase 2 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TU26_9CHLR (db=UNIREF evalue=1.0e-52 bit_score=212.6 identity=40.8 coverage=98.9010989010989)
seg (db=Seg db_id=seg from=208 to=227)
transmembrane_regions (db=TMHMM db_id=tmhmm from=115 to=134)
AMDSBA1_62_7
unknown

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9845..10216
-----------------
DNA (372bp)
protein (124aa)
hypothetical protein (db=KEGG evalue=5.2e-12 bit_score=75.9 identity=40.4 coverage=89.51612903225806)
transmembrane_regions (db=TMHMM db_id=tmhmm from=103 to=122)
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
AMDSBA1_62_8
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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10304..10870
-----------------
DNA (567bp)
protein (189aa)
acetyltransferase
GCN5-like N-acetyltransferase n=1 Tax=Burkholderia glumae BGR1 RepID=C5AIQ6_BURGB (db=UNIREF evalue=6.3e-09 bit_score=66.6 identity=39.4 coverage=51.32275132275132)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=184 evalue=3.9e-37 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=6 to=181 evalue=6.8e-33 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
AMDSBA1_62_9
unknown

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comp(10881..11636)
-----------------
DNA (756bp)
protein (252aa)
10881..11636 - ( gc_cont=0.589)
AMDSBA1_62_10
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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12515..13045
-----------------
DNA (531bp)
protein (177aa)
arsenate reductase (EC:3.1.3.48)
Protein ArsC n=1 Tax=Oceanobacillus iheyensis HTE831 RepID=ARSC_OCEIH (db=UNIREF evalue=3.0e-37 bit_score=160.6 identity=56.8 coverage=74.01129943502825)
arsC_pI258_fam: arsenate reductase (th (db=HMMTigr db_id=TIGR02691 from=36 to=164 evalue=6.7e-81 interpro_id=IPR014064 interpro_description=Arsenate reductase ArsC GO=Molecular Function: protein tyrosine phosphatase activity (GO:0004725), Molecular Function: arsenate reductase (thioredoxin) activity (GO:0030612), Biological Process: response to arsenic-containing substance (GO:0046685), Biological Process: oxidation-reduction process (GO:0055114))
no description (db=HMMSmart db_id=SM00226 from=34 to=167 evalue=6.7e-46 interpro_id=IPR023485 interpro_description=Phosphotyrosine protein phosphatase I superfamily)
AMDSBA1_62_11
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13042..14586)
-----------------
DNA (1545bp)
protein (515aa)
AMP-dependent synthetase and ligase
Putative uncharacterized protein n=1 Tax=Daphnia pulex RepID=E9HLI6_DAPPU (db=UNIREF evalue=1.9e-23 bit_score=116.3 identity=24.0 coverage=97.0873786407767)
seg (db=Seg db_id=seg from=339 to=349)
AMP_BINDING (db=PatternScan db_id=PS00455 from=151 to=162 evalue=0.0 interpro_id=IPR020845 interpro_description=AMP-binding, conserved site)
AMDSBA1_62_12
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14858..15496)
-----------------
DNA (639bp)
protein (213aa)
C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=121 to=207 evalue=7.4e-20 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process:
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=116 to=203 evalue=8.1e-17 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
no description (db=HMMSmart db_id=SM00421 from=140 to=197 evalue=6.9e-16 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
(db=HMMPfam db_id=PF00196 from=143 to=197 evalue=8.4e-15 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
AMDSBA1_62_13
unknown

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comp(15698..15997)
-----------------
DNA (300bp)
protein (100aa)
15698..15997 - ( gc_cont=0.503)
AMDSBA1_62_14
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17198..17977
-----------------
DNA (780bp)
protein (260aa)
methyltransferase
Uncharacterized methyltransferase ycgJ n=7 Tax=Bacillus RepID=YCGJ_BACSU (db=UNIREF evalue=1.1e-72 bit_score=278.9 identity=54.7 coverage=93.84615384615384)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=33 to=244 evalue=1.4e-56)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=27 to=237 evalue=9.9e-49)
AMDSBA1_62_15
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18295..18444)
-----------------
DNA (150bp)
protein (50aa)
seg (db=Seg db_id=seg from=32 to=37)
(db=HMMPfam db_id=PF04945 from=8 to=48 evalue=1.8e-14 interpro_id=IPR007029 interpro_description=YHS)
Ferritin-like (db=superfamily db_id=SSF47240 from=8 to=47 evalue=1.7e-06 interpro_id=IPR009078 interpro_description=Ferritin/ribonucleotide reductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: transition metal ion binding (GO:0046914), Biological Process: oxidation-reduction process (GO:0055114))
no description (db=HMMSmart db_id=SM00746 from=6 to=44 evalue=1.4e-05 interpro_id=IPR011017 interpro_description=TRASH)
AMDSBA1_62_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18488..19201)
-----------------
DNA (714bp)
protein (238aa)
copA; copper-translocating P-type ATPase
Copper-exporting ATPase n=2 Tax=Cupriavidus RepID=B3R1G0_CUPTR (db=UNIREF evalue=1.1e-31 bit_score=142.5 identity=38.0 coverage=85.29411764705883)
COPPER-TRANSPORTING ATPASE P-TYPE (COPA) (db=HMMPanther db_id=PTHR11939:SF39 from=1 to=232 evalue=1.3e-90)
seg (db=Seg db_id=seg from=215 to=231)
Displaying 16 items

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