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AMDSBA3_2

Alias: AMDSBA3_C1

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Displaying items 1-30 of 127 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_2_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..1372
DNA (1371bp) protein (457aa)
mod; adenine-specific DNA-methyltransferase
Adenine specific DNA methylase n=1 Tax=Cenarchaeum symbiosum A RepID=A0RWM0_CENSY (db=UNIREF evalue=1.7e-23 bit_score=116.3 identity=45.8 coverage=24.288840262582056)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=26 to=309 evalue=1.3e-32)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=2 to=315 evalue=3.5e-29)
AMDSBA3_2_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1379..3901
DNA (2523bp) protein (841aa)
type III restriction protein res subunit rbh
type III restriction protein res subunit rbh
Restriction endonuclease n=1 Tax=Cenarchaeum symbiosum A RepID=A0RWL9_CENSY (db=UNIREF evalue=1.9e-121 bit_score=442.6 identity=34.3 coverage=97.38406658739595)
AMDSBA3_2_3
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3980..5143
DNA (1164bp) protein (388aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Sulfobacillus acidophilus TPY RepID=F8I6F4_SULAT (db=UNIREF evalue=8.9e-58 bit_score=229.9 identity=75.9 coverage=35.051546391752574)
Uncharacterized protein {ECO:0000313|EMBL:KJS18728.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
Uncharacterized protein n=1 Tax=Sulfobacillus acidophilus (strain TPY) RepID=F8I6F4_SULAT
AMDSBA3_2_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5351..6517
DNA (1167bp) protein (389aa)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=175 to=370 evalue=3.1e-45 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=175 to=370 evalue=6.8e-40 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
(db=HMMPfam db_id=PF00589 from=176 to=362 evalue=2.4e-37 interpro_id=IPR002104 interpro_description=Integrase, catalytic GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
no description (db=Gene3D db_id=G3DSA:1.10.150.130 from=70 to=170 evalue=1.1e-14 interpro_id=IPR023109 interpro_description=Integrase/recombinase, N-terminal)
AMDSBA3_2_5
unknown

Not on your lists

comp(6722..6856)
DNA (135bp) protein (45aa)
6722..6856 - ( gc_cont=0.519)
AMDSBA3_2_6
unknown

Not on your lists

comp(6942..7961)
DNA (1020bp) protein (340aa)
Sialidases (db=superfamily db_id=SSF50939 from=207 to=334 evalue=1.5e-09 interpro_id=IPR011040 interpro_description=Neuraminidase)
AMDSBA3_2_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8202..9158
DNA (957bp) protein (319aa)
SerA; phosphoglycerate dehydrogenase and related dehydrogenase
D-lactate dehydrogenase n=18 Tax=Aggregatibacter RepID=G4AAT7_AGGAC (db=UNIREF evalue=1.4e-13 bit_score=82.8 identity=25.9 coverage=67.7115987460815)
D_2_HYDROXYACID_DH_3 (db=PatternScan db_id=PS00671 from=220 to=236 evalue=0.0 interpro_id=IPR006140 interpro_description=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: cofactor binding (GO:0048037), Biological Process: oxidation-reduction process (GO:0055114))
2-HYDROXYACID DEHYDROGENASE (db=HMMPanther db_id=PTHR10996 from=33 to=313 evalue=3.6e-80)
AMDSBA3_2_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9779..10312
DNA (534bp) protein (178aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 n=1 Tax=Megasphaera sp. UPII 135-E RepID=F9MP53_9FIRM (db=UNIREF evalue=7.3e-15 bit_score=86.3 identity=32.5 coverage=87.64044943820225)
seg (db=Seg db_id=seg from=1 to=14)
(db=HMMPfam db_id=PF03717 from=43 to=165 evalue=4.5e-20 interpro_id=IPR005311 interpro_description=Penicillin-binding protein, dimerisation domain GO=Molecular Function: penicillin binding (GO:0008658))
AMDSBA3_2_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10350..11669
DNA (1320bp) protein (440aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 n=2 Tax=Sulfobacillus acidophilus RepID=G8TWX1_9FIRM (db=UNIREF evalue=1.7e-166 bit_score=591.3 identity=66.1 coverage=96.5909090909091)
seg (db=Seg db_id=seg from=107 to=122)
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=26 to=406 evalue=2.1e-67 interpro_id=IPR012338 interpro_description=Beta-lactamase/transpeptidase-like)
AMDSBA3_2_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11793..12152)
DNA (360bp) protein (120aa)
11793..12152 - ( gc_cont=0.653)
Uncharacterized protein n=5 Tax=Sulfobacillus acidophilus RepID=F8IC05_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEJ40512.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA3_2_11
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12458..13771)
DNA (1314bp) protein (438aa)
mandelate racemase/muconate lactonizing protein
mandelate racemase/muconate lactonizing protein
Mandelate racemase n=1 Tax=Caligus clemensi RepID=C1C1W7_9MAXI (db=UNIREF evalue=4.1e-128 bit_score=463.8 identity=50.8 coverage=97.71689497716895)
AMDSBA3_2_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14170..15492)
DNA (1323bp) protein (441aa)
codA; cytosine deaminase
codA; cytosine deaminase
Cytosine deaminase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JFI4_9ALTE (db=UNIREF evalue=3.4e-90 bit_score=337.8 identity=46.6 coverage=85.71428571428571)
AMDSBA3_2_13
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15494..16936)
DNA (1443bp) protein (481aa)
cytosine/purines uracil thiamine allantoin permease
Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7EL09_SCLS1 (db=UNIREF evalue=3.2e-25 bit_score=122.1 identity=25.3 coverage=92.3076923076923)
seg (db=Seg db_id=seg from=116 to=131)
transmembrane_regions (db=TMHMM db_id=tmhmm from=211 to=233)
AMDSBA3_2_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17053..17307)
DNA (255bp) protein (85aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ40512.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=5 Tax=Sulfobacillus acidophilus RepID=F8IC05_SULAT
AMDSBA3_2_15
unknown

Not on your lists

17369..17542
DNA (174bp) protein (58aa)
17369..17542 + ( gc_cont=0.598)
AMDSBA3_2_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17910..19271
DNA (1362bp) protein (454aa)
broad-specificity cellobiase (EC:3.2.1.21)
broad-specificity cellobiase (EC:3.2.1.21)
Thermostable beta-glucosidase B n=1 Tax=Thermobispora bispora RepID=BGLB_THEBI (db=UNIREF evalue=1.4e-110 bit_score=405.6 identity=49.6 coverage=95.15418502202643)
AMDSBA3_2_17
Gracilibacillus halophilus, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20220..20363
DNA (144bp) protein (48aa)
20220..20363 + ( gc_cont=0.576)
Uncharacterized protein n=1 Tax=Gracilibacillus halophilus YIM-C55.5 RepID=N4WAA8_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ENH96209.1}; TaxID=1308866 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Gracilibacillus.;" source="Gracilibacillus halophilus YIM-C55.5.;"
AMDSBA3_2_18
Candidatus Acidianus copahuensis, Acidianus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(21068..22033)
DNA (966bp) protein (322aa)
agmatinase
Arginase n=2 Tax=Bilophila RepID=E5Y216_BILWA (db=UNIREF evalue=1.4e-64 bit_score=252.3 identity=42.1 coverage=94.72049689440993)
no description (db=Gene3D db_id=G3DSA:3.40.800.10 from=7 to=319 evalue=7.3e-90 interpro_id=IPR023696 interpro_description=Ureohydrolase domain)
Arginase/deacetylase (db=superfamily db_id=SSF52768 from=2 to=318 evalue=3.9e-89)
AMDSBA3_2_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22061..23497)
DNA (1437bp) protein (479aa)
amino acid/polyamine/organocation transporter
Putative uncharacterized protein n=1 Tax=Sulfolobus solfataricus P2 RepID=Q97U39_SULSO (db=UNIREF evalue=1.3e-21 bit_score=110.2 identity=25.6 coverage=70.35490605427975)
transmembrane_regions (db=TMHMM db_id=tmhmm from=167 to=189)
transmembrane_regions (db=TMHMM db_id=tmhmm from=209 to=231)
AMDSBA3_2_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23987..25126)
DNA (1140bp) protein (380aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LRE7_ACIC1 (db=UNIREF evalue=7.6e-70 bit_score=270.0 identity=45.9 coverage=82.10526315789474)
seg (db=Seg db_id=seg from=24 to=36)
AMDSBA3_2_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25551..26573
DNA (1023bp) protein (341aa)
L-aminopeptidase DmpA
Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6SPM0_BOTFB (db=UNIREF evalue=6.4e-44 bit_score=183.7 identity=35.5 coverage=97.94721407624634)
seg (db=Seg db_id=seg from=307 to=317)
seg (db=Seg db_id=seg from=244 to=259)
AMDSBA3_2_22
unknown

Not on your lists

26607..27251
DNA (645bp) protein (215aa)
seg (db=Seg db_id=seg from=32 to=48)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=27 evalue=5.0)
AMDSBA3_2_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27469..28731)
DNA (1263bp) protein (421aa)
divalent cation-transport integral membrane protein
Divalent cation-transport integral membrane protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I6X2_SULAT (db=UNIREF evalue=3.5e-132 bit_score=477.2 identity=59.3 coverage=94.29928741092637)
transmembrane_regions (db=TMHMM db_id=tmhmm from=360 to=382)
AMDSBA3_2_24
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28921..30858
DNA (1938bp) protein (646aa)
peptidase S9 prolyl oligopeptidase active site domain-containing protein
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S9, prolyl oligopeptidase active site region n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNQ0_NEPCE (db=UNIREF evalue=3.8e-98 bit_score=364.8 identity=35.3 coverage=95.3560371517028)
AMDSBA3_2_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30962..32683)
DNA (1722bp) protein (574aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=4 to=24)
seg (db=Seg db_id=seg from=466 to=481)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=33 to=573 evalue=6.4e-72)
AMDSBA3_2_26
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32848..34971)
DNA (2124bp) protein (708aa)
peptidase S9 prolyl oligopeptidase active site domain-containing protein
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Putative peptidase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCZ8_BREBN (db=UNIREF evalue=2.7e-81 bit_score=308.9 identity=30.1 coverage=92.65536723163842)
AMDSBA3_2_27
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34955..36178)
DNA (1224bp) protein (408aa)
membrane protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=207 to=229)
transmembrane_regions (db=TMHMM db_id=tmhmm from=239 to=256)
transmembrane_regions (db=TMHMM db_id=tmhmm from=268 to=287)
AMDSBA3_2_28
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(36893..38194)
DNA (1302bp) protein (434aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Aminotransferase n=1 Tax=Scheffersomyces stipitis CBS 6054 RepID=A3GGP3_PICST (db=UNIREF evalue=9.9e-74 bit_score=283.1 identity=35.8 coverage=96.54377880184332)
seg (db=Seg db_id=seg from=74 to=90)
seg (db=Seg db_id=seg from=51 to=63)
AMDSBA3_2_29
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

Not on your lists

comp(38191..38937)
DNA (747bp) protein (249aa)
acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit
Coenzyme A transferase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DHF5_9RHIZ (db=UNIREF evalue=1.0e-43 bit_score=182.6 identity=41.5 coverage=93.97590361445783)
no description (db=Gene3D db_id=G3DSA:3.40.810.20 from=6 to=237 evalue=6.5e-63)
NagB/RpiA/CoA transferase-like (db=superfamily db_id=SSF100950 from=5 to=238 evalue=3.2e-58)
AMDSBA3_2_30
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(38930..39808)
DNA (879bp) protein (293aa)
catI; 3-oxoadipate:succinyl-CoA transferase subunit B
Glutaconate CoA-transferase, subunit A n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FJB8_SACEN (db=UNIREF evalue=2.5e-28 bit_score=131.7 identity=34.2 coverage=79.86348122866895)
no description (db=Gene3D db_id=G3DSA:3.40.1080.10 from=2 to=285 evalue=1.1e-72)
NagB/RpiA/CoA transferase-like (db=superfamily db_id=SSF100950 from=2 to=288 evalue=6.4e-69)
Displaying items 1-30 of 127 in total

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