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AMDSBA3_26

Alias: AMDSBA3_C25

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Displaying items 31-47 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_26_31
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30001..31287
DNA (1287bp) protein (429aa)
major facilitator superfamily protein rbh
Probable major facilitator superfamily transporter n=1 Tax=Leptospirillum rubarum RepID=A3ES61_9BACT (db=UNIREF evalue=2.7e-31 bit_score=142.1 identity=28.0 coverage=91.6083916083916)
transmembrane_regions (db=TMHMM db_id=tmhmm from=387 to=409)
transmembrane_regions (db=TMHMM db_id=tmhmm from=312 to=334)
AMDSBA3_26_32
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31364..32119)
DNA (756bp) protein (252aa)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=1 to=241 evalue=1.1e-34)
no description (db=Gene3D db_id=G3DSA:3.60.15.10 from=15 to=250 evalue=2.5e-34)
(db=HMMPfam db_id=PF00753 from=30 to=228 evalue=1.0e-24 interpro_id=IPR001279 interpro_description=Beta-lactamase-like GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=HMMSmart db_id=SM00849 from=31 to=233 evalue=2.0e-22 interpro_id=IPR001279 interpro_description=Beta-lactamase-like GO=Molecular Function: hydrolase activity (GO:0016787))
AMDSBA3_26_33
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32234..32950
DNA (717bp) protein (239aa)
polysaccharide deacetylase
Glycoside hydrolase/deacetylase (db=superfamily db_id=SSF88713 from=25 to=235 evalue=8.8e-55 interpro_id=IPR011330 interpro_description=Glycoside hydrolase/deacetylase, beta/alpha-barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975))
(db=HMMPfam db_id=PF01522 from=36 to=155 evalue=1.7e-28 interpro_id=IPR002509 interpro_description=Polysaccharide deacetylase GO=Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810))
Polysaccharide deacetylase {ECO:0000313|EMBL:AEJ39450.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Su
AMDSBA3_26_34
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32983..33981
DNA (999bp) protein (333aa)
glycoside hydrolase family protein
glycoside hydrolase family protein
Glycoside hydrolase family 18 n=2 Tax=Sulfobacillus acidophilus RepID=G8TVD4_9FIRM (db=UNIREF evalue=8.2e-121 bit_score=439.1 identity=65.9 coverage=94.5945945945946)
AMDSBA3_26_35
unknown

Not on your lists

34193..34423
DNA (231bp) protein (77aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=3 to=21)
seg (db=Seg db_id=seg from=37 to=51)
AMDSBA3_26_36
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

34881..35447
DNA (567bp) protein (189aa)
transposase IS200-family protein
Transposase OrfA n=5 Tax=Campylobacter RepID=B2CG32_CAMFE (db=UNIREF evalue=4.8e-09 bit_score=67.0 identity=44.4 coverage=32.804232804232804)
Transposase IS200-like (db=superfamily db_id=SSF143422 from=1 to=63 evalue=1.3e-10 interpro_id=IPR002686 interpro_description=Transposase IS200-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
(db=HMMPfam db_id=PF01797 from=10 to=63 evalue=1.6e-10 interpro_id=IPR002686 interpro_description=Transposase IS200-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
AMDSBA3_26_37
unknown

Not on your lists

35502..35741
DNA (240bp) protein (80aa)
35502..35741 + ( gc_cont=0.588)
AMDSBA3_26_38
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35838..36863
DNA (1026bp) protein (342aa)
seg (db=Seg db_id=seg from=319 to=333)
seg (db=Seg db_id=seg from=258 to=269)
seg (db=Seg db_id=seg from=167 to=182)
seg (db=Seg db_id=seg from=64 to=86)
AMDSBA3_26_39
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36976..38259
DNA (1284bp) protein (428aa)
hypothetical protein
hypothetical protein
Capsular polysaccharide biosynthesis protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I2M1_SULAT (db=UNIREF evalue=1.6e-132 bit_score=478.4 identity=62.2 coverage=89.7196261682243)
seg (db=Seg db_id=seg from=395 to=416)
AMDSBA3_26_40
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38281..39807
DNA (1527bp) protein (509aa)
O-succinylbenzoate--CoA ligase n=2 Tax=Sulfobacillus acidophilus RepID=G8TVD1_9FIRM (db=UNIREF evalue=1.1e-209 bit_score=734.9 identity=71.4 coverage=98.42829076620825)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
AMDSBA3_26_41
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39825..40976)
DNA (1152bp) protein (384aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein
Cys/Met metabolism pyridoxal-phosphate-dependent protein
Cys/Met metabolism pyridoxal-phosphate-dependent protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TVD0_9FIRM (db=UNIREF evalue=6.3e-149 bit_score=532.7 identity=69.1 coverage=97.65625)
AMDSBA3_26_42
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40981..42141)
DNA (1161bp) protein (387aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein
Cys/Met metabolism pyridoxal-phosphate-dependent protein
Cystathionine beta-lyase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PTK8_9CLOT (db=UNIREF evalue=1.4e-100 bit_score=372.1 identity=49.3 coverage=97.41602067183463)
AMDSBA3_26_43
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42162..42548)
DNA (387bp) protein (129aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TVC8_9FIRM (db=UNIREF evalue=2.2e-29 bit_score=134.0 identity=53.2 coverage=95.34883720930233)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I354_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEJ39458.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA3_26_44
unknown

Not on your lists

comp(42526..42963)
DNA (438bp) protein (146aa)
seg (db=Seg db_id=seg from=114 to=127)
AMDSBA3_26_45
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43049..43714
DNA (666bp) protein (222aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TVC7_9FIRM (db=UNIREF evalue=2.7e-91 bit_score=340.5 identity=73.8 coverage=99.09909909909909)
AMDSBA3_26_46
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(43805..44254)
DNA (450bp) protein (150aa)
transposon IS605 OrfB
Transposase, IS605 OrfB family n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L6M3_9BACI (db=UNIREF evalue=1.3e-17 bit_score=95.1 identity=47.2 coverage=57.99999999999999)
(db=HMMPfam db_id=PF07282 from=19 to=90 evalue=2.8e-19 interpro_id=IPR010095 interpro_description=Transposase IS605, OrfB, C-terminal)
Transposon IS605 OrfB {ECO:0000313|EMBL:ACD83581.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" sour
AMDSBA3_26_47
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(44224..44532)
DNA (309bp) protein (103aa)
transposon IS605 OrfB
Transposon IS605 OrfB n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZ17_METI4 (db=UNIREF evalue=1.2e-17 bit_score=94.7 identity=55.8 coverage=82.52427184466019)
(db=HMMPfam db_id=PF01385 from=45 to=89 evalue=8.9e-06 interpro_id=IPR001959 interpro_description=Transposase, probable, IS891/IS1136/IS1341)
Transposon IS605 OrfB {ECO:0000313|EMBL:ACD84109.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" sour
Displaying items 31-47 of 47 in total

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