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AMDSBA3_17_27

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(25520..26548)

Top 3 Functional Annotations

Value Algorithm Source
periplasmic binding s and sugar binding domain of LacI family protein similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 341.0
  • Bit_score: 238
  • Evalue 2.10e-60
HTH-type transcriptional repressor CytR n=442 Tax=Enterobacteriaceae RepID=CYTR_ECO57 (db=UNIREF evalue=4.8e-39 bit_score=167.5 identity=31.9 coverage=89.50437317784257) similarity UNIREF
DB: UNIREF
  • Identity: 31.9
  • Coverage: 89.5
  • Bit_score: 167
  • Evalue 4.80e-39
seg (db=Seg db_id=seg from=95 to=106) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Streptomyces bottropensis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGAAAACCTTAAAGGATGTTGCGCTATACGCCGGGGTATCTGTAGCCACAGTATCCCGCGTGATCAGTGGAAACTATCCCGTAAAGGAAACTACGAGGAAGCGAGTGCTCGAGGCTATTGGCACATTGGATTATCATCCCAACGGCGTCGCTCGCAGCTTAAAAAACGCAAAAACGTATACCCTGGGGGTGTTAGTGCCAGACATTGCTAATCCCTATTTCGTTCAGTTAGTGCGTGCCGTTGAGGCCTCAGTCGAAAAGTTAGGGTATCACCTGCTGGTTGCGAGTTCCGATGAGAAGGCCTCAAAAGAATCTGAGCTAATTCGGGTTTTTTTGGAAAAACGCTTGGATGGGATGATTATCGCACCTGTTTCCGTAACACCCGCAACCGATTGGCCTCAGTTGATTGTTAATGCCTTACCAATCGTATTAGTGGATCGAATCCTGGAGGGCATCATGATTGACTCGGTCCGGGAAGAAAGCCGTCAATCGTCTAAAGAACTCGTTACCCATTTGCTAGGATATGGGCATCGTGCAATCGGTATTGTTAATGGCAGAACGTCTACGACCGCGTTAGAACGCGAATCCGGTTATCGCGAGGCTTTGCAGGAGGCAGGCATTATACCTCCGGAAGATTTTATGGTTCGTGGTGATTACGATCACAAGACCGGATATTTAGCAGGAAAACGTTTTCTATCACACAAAGAGCAAGCGCCAACAGCAGTATTTTGCACAAACAATCTCATTGCATTGGGATTCCTGCAGGCTGTACATGAATTAGGTTACCGTGTGCCCGAAGACATCTCAATAGTAAGTTTTGGGGATCCGTTTGAGGCAACTTTTCAATCGCCAAAGATGACCATCGTTGTTCAAAATCCGGCAGAAGTAGGACGTTATGCGGCCTTCATGTTGCTGGAAAAGTTAGATGGCAAGCCCGGTAAAAACGTCGAGGTAATTCTCCCAACCGTCATACGGCTAGGCGATTCGGTAAGAGCACCGCGGGAACCCGCACAAATGTATTCGAATTAA
PROTEIN sequence
Length: 343
MKTLKDVALYAGVSVATVSRVISGNYPVKETTRKRVLEAIGTLDYHPNGVARSLKNAKTYTLGVLVPDIANPYFVQLVRAVEASVEKLGYHLLVASSDEKASKESELIRVFLEKRLDGMIIAPVSVTPATDWPQLIVNALPIVLVDRILEGIMIDSVREESRQSSKELVTHLLGYGHRAIGIVNGRTSTTALERESGYREALQEAGIIPPEDFMVRGDYDHKTGYLAGKRFLSHKEQAPTAVFCTNNLIALGFLQAVHELGYRVPEDISIVSFGDPFEATFQSPKMTIVVQNPAEVGRYAAFMLLEKLDGKPGKNVEVILPTVIRLGDSVRAPREPAQMYSN*