Alias: AMDSBA3_C16
| name | lists | location/seqs | functional annotations | notes |
|---|---|---|---|---|
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AMDSBA3_17_1
unknown
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Not on your lists |
119..394
----------------- DNA (276bp) protein (92aa) |
seg (db=Seg db_id=seg from=26 to=44)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=39)
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AMDSBA3_17_2
unknown
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Not on your lists |
comp(378..923)
----------------- DNA (546bp) protein (182aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=155 to=177)
transmembrane_regions (db=TMHMM db_id=tmhmm from=94 to=116)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
seg (db=Seg db_id=seg from=102 to=117)
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AMDSBA3_17_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
1098..1484
----------------- DNA (387bp) protein (129aa) |
single-strand binding protein
Single-stranded DNA-binding protein n=4 Tax=Mobiluncus mulieris RepID=C2KT08_9ACTO (db=UNIREF evalue=3.4e-14 bit_score=83.6 identity=39.3 coverage=87.59689922480621)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=124 evalue=2.1e-45 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=2 to=109 evalue=1.8e-37 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
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AMDSBA3_17_4
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
1554..2396
----------------- DNA (843bp) protein (281aa) |
Putative uncharacterized protein orfL19 n=2 Tax=Sulfobacillus thermotolerans RepID=G5CIZ0_9FIRM (db=UNIREF evalue=3.0e-71 bit_score=274.2 identity=51.1 coverage=97.86476868327402)
vitamin K epoxide reductase
transmembrane_regions (db=TMHMM db_id=tmhmm from=111 to=130)
transmembrane_regions (db=TMHMM db_id=tmhmm from=143 to=165)
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AMDSBA3_17_5
unknown
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Not on your lists |
2546..2737
----------------- DNA (192bp) protein (64aa) |
2546..2737 + ( gc_cont=0.594)
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AMDSBA3_17_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
2724..4439
----------------- DNA (1716bp) protein (572aa) |
Resolvase domain-containing protein
rbh
Resolvase domain-containing protein
rbh
Site-specific recombinase and resolvase superfamily protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D7P2_9RHIZ (db=UNIREF evalue=8.3e-12 bit_score=77.8 identity=24.0 coverage=59.44055944055944)
seg (db=Seg db_id=seg from=468 to=487)
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AMDSBA3_17_7
unknown
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Not on your lists |
comp(4466..4633)
----------------- DNA (168bp) protein (56aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
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AMDSBA3_17_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
4768..6090
----------------- DNA (1323bp) protein (441aa) |
glutamine synthetase, type I (EC:6.3.1.2)
glutamine synthetase, type I (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CB38_9PLAN (db=UNIREF evalue=3.5e-50 bit_score=204.9 identity=30.9 coverage=95.01133786848072)
seg (db=Seg db_id=seg from=206 to=220)
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AMDSBA3_17_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
7152..7841
----------------- DNA (690bp) protein (230aa) |
HAD-superfamily hydrolase (EC:3.6.1.1)
Putative hydrolase n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=A0ADK0_STRAM (db=UNIREF evalue=1.4e-13 bit_score=82.4 identity=30.1 coverage=87.82608695652175)
HAD-like (db=superfamily db_id=SSF56784 from=4 to=216 evalue=2.2e-46 interpro_id=IPR023214 interpro_description=HAD-like domain)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=4 to=212 evalue=1.7e-30 interpro_id=IPR023214 interpro_description=HAD-like domain)
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AMDSBA3_17_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
7847..8557
----------------- DNA (711bp) protein (237aa) |
hypothetical protein
rbh
UPF0173 metal-dependent hydrolase TM_1162 n=5 Tax=Thermotoga RepID=Y1162_THEMA (db=UNIREF evalue=1.1e-42 bit_score=179.1 identity=40.0 coverage=91.9831223628692)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=8 to=236 evalue=3.5e-37)
(db=HMMPfam db_id=PF00753 from=12 to=157 evalue=2.5e-14 interpro_id=IPR001279 interpro_description=Beta-lactamase-like GO=Molecular Function: hydrolase activity (GO:0016787))
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AMDSBA3_17_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
8548..9252
----------------- DNA (705bp) protein (235aa) |
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U0I5_9FIRM (db=UNIREF evalue=1.6e-62 bit_score=245.0 identity=50.7 coverage=97.02127659574468)
seg (db=Seg db_id=seg from=129 to=140)
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AMDSBA3_17_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
9413..9862
----------------- DNA (450bp) protein (150aa) |
OsmC family protein
OsmC family protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GFB0_9FIRM (db=UNIREF evalue=5.7e-21 bit_score=106.3 identity=41.7 coverage=84.66666666666667)
OsmC-like (db=superfamily db_id=SSF82784 from=2 to=138 evalue=1.3e-35 interpro_id=IPR003718 interpro_description=Peroxiredoxin, OsmC-like protein GO=Biological Process: response to stress (GO:0006950))
no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=40 to=138 evalue=4.2e-30 interpro_id=IPR015946 interpro_description=K homology domain-like, alpha/beta)
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AMDSBA3_17_13
unknown
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Not on your lists |
9948..10124
----------------- DNA (177bp) protein (59aa) |
9948..10124 + ( gc_cont=0.542)
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AMDSBA3_17_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
10240..11301
----------------- DNA (1062bp) protein (354aa) |
GTP-binding protein YchF
GTP-binding protein YchF n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVR0_9BACT (db=UNIREF evalue=1.0e-44 bit_score=186.4 identity=34.2 coverage=99.43502824858757)
seg (db=Seg db_id=seg from=164 to=180)
seg (db=Seg db_id=seg from=145 to=161)
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AMDSBA3_17_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
11317..12603
----------------- DNA (1287bp) protein (429aa) |
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
rbh
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
rbh
Glutamate-1-semialdehyde 2,1-aminomutase n=2 Tax=Sulfobacillus acidophilus RepID=G8U0I9_9FIRM (db=UNIREF evalue=7.3e-170 bit_score=602.4 identity=71.3 coverage=97.9020979020979)
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AMDSBA3_17_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(12640..13449)
----------------- DNA (810bp) protein (270aa) |
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Methylococcus capsulatus str. Bath RepID=Q60A53_METCA (db=UNIREF evalue=4.8e-26 bit_score=124.0 identity=33.5 coverage=91.11111111111111)
L,D-transpeptidase catalytic domain-like (db=superfamily db_id=SSF141523 from=115 to=250 evalue=7.0e-27)
(db=HMMPfam db_id=PF03734 from=119 to=249 evalue=1.6e-14 interpro_id=IPR005490 interpro_description=L,D-transpeptidase catalytic domain GO=Molecular Function: transferase activity (GO:0016740))
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AMDSBA3_17_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
13493..13735
----------------- DNA (243bp) protein (81aa) |
MoaD/ThiS (db=superfamily db_id=SSF54285 from=3 to=80 evalue=8.0e-15 interpro_id=IPR016155 interpro_description=Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp)
(db=HMMPfam db_id=PF02597 from=23 to=80 evalue=3.2e-10 interpro_id=IPR003749 interpro_description=ThiamineS)
no description (db=Gene3D db_id=G3DSA:3.10.20.30 from=3 to=80 evalue=6.2e-10 interpro_id=IPR012675 interpro_description=Beta-grasp fold, ferredoxin-type)
molybdopterin synthase subunit MoaD
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AMDSBA3_17_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
13738..14178
----------------- DNA (441bp) protein (147aa) |
moaE; Molybdopterin synthase catalytic subunit
Molybdopterin-converting factor subunit 2 (Molybdopterin synthase subunit 2) (MPT synthase subunit 2) (Molybdenum cofactor biosynthesis protein E) (Molybdopterin-converting factor large subunit) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEV7_9BACT (db=UNIREF evalue=1.3e-25 bit_score=121.7 identity=44.0 coverage=91.15646258503402)
coiled-coil (db=Coil db_id=coil from=49 to=74 evalue=NA)
Molybdopterin synthase subunit MoaE (db=superfamily db_id=SSF54690 from=3 to=137 evalue=1.1e-44 interpro_id=IPR003448 interpro_description=Molybdopterin biosynthesis MoaE GO=Biological Process: Mo-molybdopterin cofactor biosynthetic process (GO:0006777))
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AMDSBA3_17_19
CG_Elusi_03, Elusimicrobia, Bacteria
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Not on your lists |
comp(14407..17016)
----------------- DNA (2610bp) protein (870aa) |
(db=HMMPfam db_id=PF04685 from=373 to=750 evalue=4.4e-44 interpro_id=IPR006775 interpro_description=Glucosylceramidase GO=Molecular Function: glucosylceramidase activity (GO:0004348), Biological Process: sphingolipid metabolic process (GO:0006665), Cellular Component: integral to membrane (GO:0016021))
(db=HMMPfam db_id=PF12215 from=8 to=329 evalue=4.1e-38 interpro_id=IPR024462 interpro_description=Beta-glucosidase, GBA2 type, N-terminal)
Six-hairpin glycosidases (db=superfamily db_id=SSF48208 from=331 to=782 evalue=2.0e-22 interpro_id=IPR008928 interpro_description=Six-hairpin glycosidase-like GO=Molecular Function: catalytic activity (GO:0003824))
BILE ACID BETA-GLUCOSIDASE-RELATED (db=HMMPanther db_id=PTHR12654 from=1 to=659 evalue=6.0e-10)
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AMDSBA3_17_20
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria
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Not on your lists |
comp(17072..18070)
----------------- DNA (999bp) protein (333aa) |
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide transporter domain family protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IGF3_ACIB4 (db=UNIREF evalue=5.4e-64 bit_score=250.4 identity=39.8 coverage=97.2972972972973)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=10 to=323 evalue=4.1e-116)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=158 to=172 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
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AMDSBA3_17_21
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(18054..19061)
----------------- DNA (1008bp) protein (336aa) |
peptide ABC transporter ATP-binding protein
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YIU2_METS5 (db=UNIREF evalue=2.0e-37 bit_score=162.2 identity=43.2 coverage=54.166666666666664)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=5 to=318 evalue=7.0e-120)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=154 to=168 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
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AMDSBA3_17_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(19058..19999)
----------------- DNA (942bp) protein (314aa) |
ABC transporter
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natrialba magadii ATCC 43099 RepID=D3STJ8_NATMM (db=UNIREF evalue=1.3e-38 bit_score=166.0 identity=34.2 coverage=93.63057324840764)
transmembrane_regions (db=TMHMM db_id=tmhmm from=97 to=119)
transmembrane_regions (db=TMHMM db_id=tmhmm from=263 to=285)
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AMDSBA3_17_23
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria
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Not on your lists |
comp(20004..20990)
----------------- DNA (987bp) protein (329aa) |
binding-protein-dependent transport systems inner membrane component
Dipeptide transport system permease protein dppB n=1 Tax=Capnocytophaga canimorsus Cc5 RepID=F9YVU0_CAPCC (db=UNIREF evalue=4.2e-24 bit_score=117.9 identity=31.3 coverage=77.81155015197568)
transmembrane_regions (db=TMHMM db_id=tmhmm from=147 to=169)
transmembrane_regions (db=TMHMM db_id=tmhmm from=293 to=315)
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AMDSBA3_17_24
Thermobaculum terrenum, Thermobaculum, Bacteria
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Not on your lists |
comp(21114..22307)
----------------- DNA (1194bp) protein (398aa) |
hypothetical protein
Putative uncharacterized protein n=2 Tax=Rhodopirellula baltica RepID=F2AMB3_RHOBT (db=UNIREF evalue=4.5e-33 bit_score=147.9 identity=26.2 coverage=97.73869346733667)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBN0_THET1
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AMDSBA3_17_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(22411..24114)
----------------- DNA (1704bp) protein (568aa) |
family 5 extracellular solute-binding protein
Dipeptide-binding protein of ABC transport system n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R0E1_MYCS2 (db=UNIREF evalue=1.4e-27 bit_score=130.2 identity=25.5 coverage=81.69014084507043)
seg (db=Seg db_id=seg from=14 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
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AMDSBA3_17_26
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria
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Not on your lists |
comp(24198..25505)
----------------- DNA (1308bp) protein (436aa) |
alpha-galactosidase (EC:3.2.1.22)
Glycoside hydrolase family 4 n=4 Tax=Thermoanaerobacter RepID=E1FAX6_9THEO (db=UNIREF evalue=1.6e-18 bit_score=99.8 identity=31.2 coverage=49.31192660550459)
LDH C-terminal domain-like (db=superfamily db_id=SSF56327 from=167 to=426 evalue=9.2e-62 interpro_id=IPR015955 interpro_description=Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Biological Process: oxidation-reduction process (GO:0055114))
no description (db=Gene3D db_id=G3DSA:3.90.110.10 from=166 to=422 evalue=9.0e-55 interpro_id=IPR015955 interpro_description=Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Biological Process: oxidation-reduction process (GO:0055114))
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AMDSBA3_17_27
Streptomyces bottropensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(25520..26548)
----------------- DNA (1029bp) protein (343aa) |
periplasmic binding s and sugar binding domain of LacI family protein
HTH-type transcriptional repressor CytR n=442 Tax=Enterobacteriaceae RepID=CYTR_ECO57 (db=UNIREF evalue=4.8e-39 bit_score=167.5 identity=31.9 coverage=89.50437317784257)
seg (db=Seg db_id=seg from=95 to=106)
HTH_LACI_1 (db=PatternScan db_id=PS00356 from=4 to=22 evalue=0.0 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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AMDSBA3_17_28
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria
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Not on your lists |
26751..27788
----------------- DNA (1038bp) protein (346aa) |
amidohydrolase
Amidohydrolase 2 n=2 Tax=Rhodopirellula baltica RepID=F2AZL7_RHOBT (db=UNIREF evalue=2.4e-70 bit_score=271.6 identity=43.5 coverage=94.50867052023122)
(db=HMMPfam db_id=PF04909 from=61 to=335 evalue=1.4e-26 interpro_id=IPR006992 interpro_description=Amidohydrolase 2 GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
Metallo-dependent hydrolases (db=superfamily db_id=SSF51556 from=17 to=335 evalue=1.8e-24)
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AMDSBA3_17_29
unknown
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Not on your lists |
27888..28055
----------------- DNA (168bp) protein (56aa) |
27888..28055 + ( gc_cont=0.500)
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AMDSBA3_17_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
28048..28872
----------------- DNA (825bp) protein (275aa) |
DeoR family transcriptional regulator
seg (db=Seg db_id=seg from=234 to=245)
HTH_DEOR_1 (db=PatternScan db_id=PS00894 from=15 to=49 evalue=0.0 interpro_id=IPR018356 interpro_description=Transcription regulator, HTH DeoR-type, conserved site GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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