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AMDSBA3_17_27 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
periplasmic binding s and sugar binding domain of LacI family protein similarity KEGG
DB: KEGG
40.2 341.0 238 2.10e-60 nal:B005_0256
HTH-type transcriptional repressor CytR n=442 Tax=Enterobacteriaceae RepID=CYTR_ECO57 (db=UNIREF evalue=4.8e-39 bit_score=167.5 identity=31.9 coverage=89.50437317784257) similarity UNIREF
DB: UNIREF
31.9 89.5 167 4.80e-39 nal:B005_0256
seg (db=Seg db_id=seg from=95 to=106) iprscan interpro
DB: Seg
null null null null nal:B005_0256
HTH_LACI_1 (db=PatternScan db_id=PS00356 from=4 to=22 evalue=0.0 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
null null null 0.0 nal:B005_0256
Periplasmic binding protein-like I (db=superfamily db_id=SSF53822 from=61 to=340 evalue=3.5e-70) iprscan interpro
DB: superfamily
null null null 3.50e-70 nal:B005_0256
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=161 to=308 evalue=6.6e-35) iprscan interpro
DB: Gene3D
null null null 6.60e-35 nal:B005_0256
no description (db=HMMSmart db_id=SM00354 from=1 to=71 evalue=1.3e-33 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null null null 1.30e-33 nal:B005_0256
(db=HMMPfam db_id=PF00532 from=60 to=308 evalue=1.9e-25 interpro_id=IPR001761 interpro_description=Periplasmic binding protein/LacI transcriptional regulator) iprscan interpro
DB: HMMPfam
null null null 1.90e-25 nal:B005_0256
(db=HMMPfam db_id=PF00356 from=3 to=48 evalue=4.5e-19 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 4.50e-19 nal:B005_0256
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=58 evalue=7.2e-18 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: superfamily
null null null 7.20e-18 nal:B005_0256
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=2 to=59 evalue=4.7e-16 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: Gene3D
null null null 4.70e-16 nal:B005_0256
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=59 to=147 evalue=1.1e-06) iprscan interpro
DB: Gene3D
null null null 1.10e-06 nal:B005_0256
HTHLACI (db=FPrintScan db_id=PR00036 from=13 to=23 evalue=5.0e-05 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 5.00e-05 nal:B005_0256
HTHLACI (db=FPrintScan db_id=PR00036 from=3 to=13 evalue=5.0e-05 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 5.00e-05 nal:B005_0256
HTH_LACI_2 (db=ProfileScan db_id=PS50932 from=2 to=56 evalue=30.859 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 3.09e+01 nal:B005_0256
Catabolite control protein A {ECO:0000313|EMBL:EMF50360.1}; TaxID=1054862 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bottropensis ATCC UNIPROT
DB: UniProtKB
38.3 345.0 240 4.60e-60 M3FC41_9ACTN
LacI family transcriptional regulator n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NIA0_9ACTO similarity UNIREF
DB: UNIREF90
39.9 null 239 1.70e-60 nal:B005_0256