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AMDSBA3_19_2

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 316..867

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=10 to=26) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=3 to=72 evalue=5.7e-15 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.70e-15
no description (db=HMMSmart db_id=SM00530 from=11 to=66 evalue=4.6e-14 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.60e-14

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Taxonomy

Clostridium sp. CAG:81 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 552
ATGGATTCAGATAAAAATGCAATTGGAGATCGGATTCGCAGGTTGCGGCGGCGACACGACCTGACTCAGCGTCAATTGGCGGCTCGATTAGGTGTAGCTGGGTCCACCGTCGCGAATTGGGAAGTCGGGTCTAGCCCGCTCAGTTCGCAATCGATTAAAAAAGTCGCCACGTTTTTTGGTGTCTCGGAACGATGGCTCGAAACCGGAGAAGGCTCATCGAACGACTCTGAAATCATCGAAACGCGATGGCCATTTGAGGCACTGCGGAGGCAGTGGGGCGTCAATGCTCAGTTCCTACCGGCGGAATGGCCGGATCGCTTTCAGGAATATGTTTCGCTAGCCGTGCAGTTCGGCCTAAATCCGCAAGAGGCGACGTTTCGCGCGATGGTCGCAAAGGCACAAGAATTGGGCACAGACACCCCGCTCCCACTGGCCTTGACCGCGCCCGACTCCCCCAGAAAGCGTCAATTGGCGGATTGGATTCTTTTGGGCACGGATGCGGCATTAGATATCGTTGAGGATGCGCGCCGCAAAGCCCAGCGGAAGGAATAA
PROTEIN sequence
Length: 184
MDSDKNAIGDRIRRLRRRHDLTQRQLAARLGVAGSTVANWEVGSSPLSSQSIKKVATFFGVSERWLETGEGSSNDSEIIETRWPFEALRRQWGVNAQFLPAEWPDRFQEYVSLAVQFGLNPQEATFRAMVAKAQELGTDTPLPLALTAPDSPRKRQLADWILLGTDAALDIVEDARRKAQRKE*