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AMDSBA3_19_2 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
seg (db=Seg db_id=seg from=10 to=26) iprscan interpro
DB: Seg
null null null null
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=3 to=72 evalue=5.7e-15 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: superfamily
null null null 5.70e-15
no description (db=HMMSmart db_id=SM00530 from=11 to=66 evalue=4.6e-14 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMSmart
null null null 4.60e-14
(db=HMMPfam db_id=PF01381 from=12 to=66 evalue=5.7e-13 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMPfam
null null null 5.70e-13
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=8 to=83 evalue=6.1e-13 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: Gene3D
null null null 6.10e-13
HTH_CROC1 (db=ProfileScan db_id=PS50943 from=12 to=66 evalue=14.943 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: ProfileScan
null null null 1.49e+01
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:CCY10956.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" UNIPROT
DB: UniProtKB
29.1 151.0 76 6.10e-11 R5GEP5_9CLOT