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AMDSBA3_23_14

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 13313..13813

Top 3 Functional Annotations

Value Algorithm Source
HTH_MARR_1 (db=PatternScan db_id=PS01117 from=80 to=114 evalue=0.0 interpro_id=IPR023187 interpro_description=Transcriptional regulator MarR-type, conserved site) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=16 to=153 evalue=3.1e-26) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.10e-26
no description (db=HMMSmart db_id=SM00347 from=39 to=141 evalue=1.7e-16 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.70e-16

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Taxonomy

GWC2_OD1_41_9 → Yanofskybacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGACCAAAAATTTAGGAATACCTACAGATTTTTCGAACGAACATCTCAGTGTAGATGAGGCGCTCAGTCGCTTGCTAAGTATTCAAGCCCGAACGTTTGCGTTGTTCGTTGAACGCCGGGCAGAGCGTCAAGATGGCAGTCCCACACGCATGCAGCGGTTTGTTTTGCGTACCGTCGCAGAACGGGGACCTGTAACCGTCACGCAGCTAGCTGACACCCTTAGTGTCTCTGCCCCGACTGCCAGTCAACTGGTGAACACACTCGTCGAACGAGGGTGGCTCAATGTCGAACTGTCCACGCGTGATCGGCGCCGCCACGACGTCCATATTACCCCGGCGGGAAAACAATTGTTAGCTGAGCAATCGCGAAAGCGTCTAAACAGCATACAAAAAATTTTAGAGCAATTGACTCCAGAAGAACGCACGCAACTGGTCTGCATGTTGGACCGAGTCGTCACCCTCTGGCAGTCTTCTGAAGGGAGTTCCGAGAATGGCCGTTGA
PROTEIN sequence
Length: 167
MTKNLGIPTDFSNEHLSVDEALSRLLSIQARTFALFVERRAERQDGSPTRMQRFVLRTVAERGPVTVTQLADTLSVSAPTASQLVNTLVERGWLNVELSTRDRRRHDVHITPAGKQLLAEQSRKRLNSIQKILEQLTPEERTQLVCMLDRVVTLWQSSEGSSENGR*