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AMDSBA3_23_14 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
HTH_MARR_1 (db=PatternScan db_id=PS01117 from=80 to=114 evalue=0.0 interpro_id=IPR023187 interpro_description=Transcriptional regulator MarR-type, conserved site) iprscan interpro
DB: PatternScan
null null null 0.0 ams:AMIS_8910
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=16 to=153 evalue=3.1e-26) iprscan interpro
DB: superfamily
null null null 3.10e-26 ams:AMIS_8910
no description (db=HMMSmart db_id=SM00347 from=39 to=141 evalue=1.7e-16 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null null null 1.70e-16 ams:AMIS_8910
(db=HMMPfam db_id=PF01047 from=52 to=105 evalue=2.0e-11 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 2.00e-11 ams:AMIS_8910
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=48 to=121 evalue=3.5e-11 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 3.50e-11 ams:AMIS_8910
HTHMARR (db=FPrintScan db_id=PR00598 from=82 to=97 evalue=4.0e-08 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 4.00e-08 ams:AMIS_8910
HTHMARR (db=FPrintScan db_id=PR00598 from=65 to=81 evalue=4.0e-08 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 4.00e-08 ams:AMIS_8910
HTHMARR (db=FPrintScan db_id=PR00598 from=131 to=151 evalue=4.0e-08 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 4.00e-08 ams:AMIS_8910
HTHMARR (db=FPrintScan db_id=PR00598 from=101 to=117 evalue=4.0e-08 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 4.00e-08 ams:AMIS_8910
HTH_MARR_2 (db=ProfileScan db_id=PS50995 from=19 to=153 evalue=24.298 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 2.43e+01 ams:AMIS_8910
Transcriptional regulator, MarR Tax=GWC2_OD1_41_9 UNIPROT
DB: UniProtKB
32.1 137.0 67 1.50e-08 ggdbv1_3828172
Regulatory protein MarR n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1DV06_9MICO similarity UNIREF
DB: UNIREF90
32.3 null 65 2.20e-08 ams:AMIS_8910
putative MarR-family transcriptional regulator KEGG
DB: KEGG
34.0 103.0 64 3.40e-08 ams:AMIS_8910