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AMDSBA3_26_15

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 14120..14665

Top 3 Functional Annotations

Value Algorithm Source
rimM; 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 178.0
  • Bit_score: 212
  • Evalue 8.30e-53
Ribosome maturation factor RimM n=1 Tax=Sphingopyxis alaskensis RB2256 RepID=RIMM_SPHAL (db=UNIREF evalue=1.1e-07 bit_score=62.4 identity=31.5 coverage=76.92307692307693) similarity UNIREF
DB: UNIREF
  • Identity: 31.5
  • Coverage: 76.92
  • Bit_score: 62
  • Evalue 1.10e-07
16S_RimM: 16S rRNA processing protein RimM (db=HMMTigr db_id=TIGR02273 from=12 to=176 evalue=9.2e-39 interpro_id=IPR011961 interpro_description=16S rRNA processing protein RimM GO=Cellular Component: ribosome (GO:0005840), Biological Process: rRNA processing (GO:0006364), Molecular Function: ribosome binding (GO:0043022)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.20e-39

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 546
ATGAATCGTAAAGACGCGCGCATTTGGCCCGGTTATGTCATGGTAGGCGAGGTGACGTCGCCTTTTGGGATCGATGGCTCTGTGCGAGTGTACGCGACCACGGATTTTCCGGAGCGGTTGGTGACACTTACCCAGGTGGCCGTGGACTTGCTGGGTGAGACGTGTGGCGTGGTGAGTAGCCGTCTGGCATCGCCGTCGCTGGCGGTGATGAAGCTGGCGGGATTTACCACGCGAGAGCAAGCGGCTCGTTTACGGGGAGCGGTATTGATGGTGCCCACGAGCGAGTTGCCGACGTTGGCGCCTGACGAGTATTATTGGCATCAGTTGTTGGGTTTGACCGTCGTGGAAGCGGATAGTGGTCGGGTGCTAGGAGAGTTGGCCCATGTCTTGCGCACGGGCGCAAGCCACGACGTGTTTGAGGTGACGCGGGAGGGCAAGAAACCGCTTTTGATTCCTGCCCTAAAGTCGGTGGTGCTTGAGGTTGACCTACGTCAGGCGCGCATGCTGGTCCGGCTTTTGCCGGGTTTAGAGGAGATTGGCGAGTGA
PROTEIN sequence
Length: 182
MNRKDARIWPGYVMVGEVTSPFGIDGSVRVYATTDFPERLVTLTQVAVDLLGETCGVVSSRLASPSLAVMKLAGFTTREQAARLRGAVLMVPTSELPTLAPDEYYWHQLLGLTVVEADSGRVLGELAHVLRTGASHDVFEVTREGKKPLLIPALKSVVLEVDLRQARMLVRLLPGLEEIGE*